RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 FAM220BPB1ANY3 271 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 RPSAP08865 295 aaKnown RBP13.88□□□□□ -0.19
SSH1-208ENST00000548522 SBK2P0C263 348 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 FUT1P19526 365 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 GDI2P50395 445 aaKnown RBP13.88□□□□□ -0.19
SSH1-208ENST00000548522 PPP1CBP62140 327 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 ZNF154Q13106 437 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 SGCAQ16586 387 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 RABL3Q5HYI8 236 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 INTS11Q5TA45 600 aaKnown RBP13.88□□□□□ -0.19
SSH1-208ENST00000548522 TREML4Q6UXN2 200 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 RBMS3Q6XE24 437 aaKnown RBP13.88□□□□□ -0.19
SSH1-208ENST00000548522 JAZF1Q86VZ6 243 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 NKAIN4Q8IVV8 208 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 ADGRG5Q8IZF4 528 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 TMEM255BQ8WV15 326 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 MPP4Q96JB8 637 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 PKP2Q99959 881 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 EGLN1Q9GZT9 426 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 POFUT1Q9H488 388 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 YY1AP1Q9H869 796 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 INIPQ9NRY2 104 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 NUP50Q9UKX7 468 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 NPTNQ9Y639 398 aa13.88□□□□□ -0.19
SSH1-208ENST00000548522 PPIAL4EA0A075B759 164 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 IGHV3OR16-10A0A075B7F0 116 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 PPIAL4CA0A0B4J2A2 164 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 PPIAL4DF5H284 164 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 GMNNO75496 209 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 FOXH1O75593 365 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 OR7A10O76100 309 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 IGHMP01871 453 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 ADH4P08319 380 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 PPIAL4FP0DN26 164 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 LAP3P28838 519 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 MSX2P35548 267 aaPredicted RBP13.87□□□□□ -0.19
SSH1-208ENST00000548522 DAP3P51398 398 aaKnown RBP13.87□□□□□ -0.19
SSH1-208ENST00000548522 CD47Q08722 323 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 BAMBIQ13145 260 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 TOP3AQ13472 1001 aaPredicted RBP13.87□□□□□ -0.19
SSH1-208ENST00000548522 LPCAT4Q643R3 524 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 CALHM3Q86XJ0 350 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 NSMCE2Q96MF7 247 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 OR2H1Q9GZK4 316 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 EIF3KQ9UBQ5 218 aaKnown RBP13.87□□□□□ -0.19
SSH1-208ENST00000548522 EGFL7Q9UHF1 273 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 KLHL21Q9UJP4 597 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 AUP1Q9Y679 476 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 TANC2Q9HCD6 1990 aa13.87□□□□□ -0.19
SSH1-208ENST00000548522 CENPBD1B2RD01 187 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 PIP5K1CO60331 668 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 MT-ND1P03886 318 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 CD55P08174 381 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 IGHV4-38-2P0DP08 117 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 ZNF12P17014 697 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 FASP25445 335 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 PCGF2P35227 344 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 AQP4P55087 323 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 TNFAIP6P98066 277 aaPredicted RBP13.86□□□□□ -0.19
SSH1-208ENST00000548522 SLC3A1Q07837 685 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 MED21Q13503 144 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 ZMYND11Q15326 602 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 ZNF774Q6NX45 483 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 OR2T12Q8NG77 320 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 CANT1Q8WVQ1 401 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 CENPNQ96H22 339 aaPredicted RBP13.86□□□□□ -0.19
SSH1-208ENST00000548522 ZNF583Q96ND8 569 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 KCNN2Q9H2S1 579 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 KAT8Q9H7Z6 458 aaKnown RBP13.86□□□□□ -0.19
SSH1-208ENST00000548522 TMEM106BQ9NUM4 274 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 PLEK2Q9NYT0 353 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 INSIG2Q9Y5U4 225 aa13.86□□□□□ -0.19
SSH1-208ENST00000548522 TIMM8AO60220 97 aaPredicted RBP13.85□□□□□ -0.19
SSH1-208ENST00000548522 RNASE1P07998 156 aaKnown RBP13.85□□□□□ -0.19
SSH1-208ENST00000548522 TSPAN19P0C672 248 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 ZNF26P17031 533 aaPredicted RBP13.85□□□□□ -0.19
SSH1-208ENST00000548522 SLC6A9P48067 706 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 ERFP50548 548 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 PSG7Q13046 419 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 LAPTM4AQ15012 233 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 SLC9A3R2Q15599 337 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 LEG1Q6P5S2 330 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 ERICH5Q6P6B1 374 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 SLC25A47Q6Q0C1 308 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 CYP2R1Q6VVX0 501 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 Q6ZR03 302 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 PATL1Q86TB9 770 aaKnown RBP13.85□□□□□ -0.19
SSH1-208ENST00000548522 EME1Q96AY2 570 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 SGTBQ96EQ0 304 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 SIGLEC11Q96RL6 698 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 MAGIXQ9H6Y5 334 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 SMURF2Q9HAU4 748 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 PATZ1Q9HBE1 687 aaKnown RBP13.85□□□□□ -0.19
SSH1-208ENST00000548522 CYSLTR2Q9NS75 346 aa13.85□□□□□ -0.19
SSH1-208ENST00000548522 MDFIC2A0A1B0GVS7 189 aa13.84□□□□□ -0.19
SSH1-208ENST00000548522 ELOVL7A1L3X0 281 aa13.84□□□□□ -0.19
SSH1-208ENST00000548522 F5H0A9 414 aaPredicted RBP13.84□□□□□ -0.19
SSH1-208ENST00000548522 ICMTO60725 284 aa13.84□□□□□ -0.19
SSH1-208ENST00000548522 SCG5P05408 212 aa13.84□□□□□ -0.19
SSH1-208ENST00000548522 MDKP21741 143 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms