RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 A0A1B0GVI7 797 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 ANXA2P2A6NMY6 339 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 ANXA2P07355 339 aaKnown RBP11.88□□□□□ -0.51
PTCH1-215ENST00000547672 CALCBP10092 127 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 RFC3P40938 356 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 KIR3DL2P43630 455 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 PSMA6P60900 246 aaKnown RBP11.88□□□□□ -0.51
PTCH1-215ENST00000547672 HIST1H3AP68431 136 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 SCN1BQ07699 218 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 INSL4Q14641 139 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 TRIM16LQ309B1 348 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 HIST2H3PS2Q5TEC6 136 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 HIST2H3AQ71DI3 136 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 SPATC1Q76KD6 591 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 ELMOD2Q8IZ81 293 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 IL17RDQ8NFM7 739 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF671Q8TAW3 534 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 CHPT1Q8WUD6 406 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 TMEM106AQ96A25 262 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 SARAFQ96BY9 339 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 HDHD2Q9H0R4 259 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 DEFB127Q9H1M4 99 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 SLCO5A1Q9H2Y9 848 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 EMC7Q9NPA0 242 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 DDX28Q9NUL7 540 aaKnown RBP11.88□□□□□ -0.51
PTCH1-215ENST00000547672 ASH2LQ9UBL3 628 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 NUFIP1Q9UHK0 495 aaKnown RBP11.88□□□□□ -0.51
PTCH1-215ENST00000547672 SPATA2Q9UM82 520 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 TIMM10BQ9Y5J6 103 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 ETV7Q9Y603 341 aa11.88□□□□□ -0.51
PTCH1-215ENST00000547672 FREM3P0C091 2139 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 KIAA1549Q9HCM3 1950 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF292O60281 2723 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 A0A1B0GVC2 190 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 IFITM5A6NNB3 132 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 H0YC42 278 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 MKRN2OSH3BPM6 223 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 RPL36A-HNRNPH2H7BZ11 118 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 AIPO00170 330 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 AQP7O14520 342 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 SRSF10O75494 262 aaKnown RBP11.87□□□□□ -0.51
PTCH1-215ENST00000547672 ITGB2P05107 769 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 ERCC1P07992 297 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-215ENST00000547672 CELA3AP09093 270 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 CDAP32320 146 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 NR4A2P43354 598 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 FOXC1Q12948 553 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 RIN1Q13671 783 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF169Q14929 603 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-215ENST00000547672 ELFN2Q5R3F8 820 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 HACD4Q5VWC8 232 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 GLT8D1Q68CQ7 371 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 CORO6Q6QEF8 472 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 STAC2Q6ZMT1 411 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 LAX1Q8IWV1 398 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 OR8H2Q8N162 312 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 OR5D14Q8NGL3 314 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 OR13C3Q8NGS6 347 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 OR13C5Q8NGS8 318 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 WDYHV1Q96HA8 205 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 COX4I2Q96KJ9 171 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF416Q9BWM5 594 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 PPIL3Q9H2H8 161 aaKnown RBP11.87□□□□□ -0.51
PTCH1-215ENST00000547672 CCDC86Q9H6F5 360 aaKnown RBP11.87□□□□□ -0.51
PTCH1-215ENST00000547672 CRLF2Q9HC73 371 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 GPR35Q9HC97 309 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 NEK6Q9HC98 313 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 CYSLTR2Q9NS75 346 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 TMEM38BQ9NVV0 291 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 UPB1Q9UBR1 384 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 CAMK2AQ9UQM7 478 aa11.87□□□□□ -0.51
PTCH1-215ENST00000547672 MED13Q9UHV7 2174 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 A0A1W2PPK0 400 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 OR14I1A6ND48 311 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 SLC22A20A6NK97 555 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF587BE7ETH6 402 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 RRP8O43159 456 aaKnown RBP11.86□□□□□ -0.51
PTCH1-215ENST00000547672 HPGDSO60760 199 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 NCR1O76036 304 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 PNPP00491 289 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 CRYABP02511 175 aaKnown RBP11.86□□□□□ -0.51
PTCH1-215ENST00000547672 WT1P19544 449 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-215ENST00000547672 FSTP19883 344 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 KLK2P20151 261 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 CFPP27918 469 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 SOX2P48431 317 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 TPTEP56180 551 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 CAV3P56539 151 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 RAB35Q15286 201 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 PYDC2Q56P42 97 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 FAM27D1Q5T7N8 215 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 RPUSD3Q6P087 351 aaKnown RBP11.86□□□□□ -0.51
PTCH1-215ENST00000547672 P4HA3Q7Z4N8 544 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 SERPINA12Q8IW75 414 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 WDFY1Q8IWB7 410 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 CDH26Q8IXH8 852 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF100Q8IYN0 542 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF433Q8N7K0 673 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF283Q8N7M2 679 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 NKAIN3Q8N8D7 197 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms