RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 GRB2P62993 217 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 TAF13Q15543 124 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 GSG1Q2KHT4 349 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 HIKESHIQ53FT3 197 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 ELFN2Q5R3F8 820 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 OTPQ5XKR4 325 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 ZNF544Q6NX49 715 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 TMEM154Q6P9G4 183 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 KCTD8Q6ZWB6 473 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 ZNF367Q7RTV3 350 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 MAP6Q96JE9 813 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 ZNF649Q9BS31 505 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 OR2H1Q9GZK4 316 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 SLC17A5Q9NRA2 495 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 CENPMQ9NSP4 180 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 CLEC2DQ9UHP7 191 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 KLHDC2Q9Y2U9 406 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 NCOA6Q14686 2063 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 FAM208BQ5VWN6 2430 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 OR5H1A6NKK0 313 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 J3QLW9 94 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 DOK2O60496 412 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 MMP7P09237 267 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 SMIM18P0DKX4 95 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 COX5BP10606 129 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 PSKH1P11801 424 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 PPP3CBP16298 524 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 ZNF19P17023 458 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 JUNBP17275 347 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 MAP2K4P45985 399 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 GBX2P52951 348 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 RAB1AP62820 205 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 BDH1Q02338 343 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 MED22Q15528 200 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 TIMM23BQ5SRD1 257 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 ZNF684Q5T5D7 378 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 UBE2UQ5VVX9 321 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 CFAP77Q6ZQR2 320 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 SSX6Q7RTT6 188 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 ZNF808Q8N4W9 903 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 YIPF7Q8N8F6 280 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 MUCL1Q96DR8 90 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 C4orf36Q96KX1 117 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 ATF6BQ99941 703 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 ISYNA1Q9NPH2 558 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 KCNJ16Q9NPI9 418 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 TRIM36Q9NQ86 728 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 DDX28Q9NUL7 540 aaKnown RBP13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 BABAM2Q9NXR7 383 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 GNG8Q9UK08 70 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 BSNQ9UPA5 3926 aa13.84□□□□□ -0.19
TRAFD1-203ENST00000547063 PCNX1Q96RV3 2341 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 IQCMA0A1B0GVH7 501 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 OR6C6A6NF89 314 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 HLA-HP01893 362 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 ADRA2AP08913 450 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 HSD11B1P28845 292 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 OPRL1P41146 370 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 OR12D2P58182 307 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 PSG4Q00888 419 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 ACSM1Q08AH1 577 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 NEDD8Q15843 81 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 ZNF829Q3KNS6 432 aaPredicted RBP13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 CCDC58Q4VC31 144 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 TP53I3Q53FA7 332 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 CCDC92Q53HC0 331 aaPredicted RBP13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 OR2G6Q5TZ20 316 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 LRRN1Q6UXK5 716 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 VASH1Q7L8A9 365 aaPredicted RBP13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 RFLNBQ8N5W9 214 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 FAM169BQ8N8A8 192 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 OR1F12Q8NHA8 337 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 SPRYD4Q8WW59 207 aaPredicted RBP13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 HSD17B8Q92506 261 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 SPTSSAQ969W0 71 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 COG8Q96MW5 612 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 AMELYQ99218 206 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 COQ7Q99807 217 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 ELOVL3Q9HB03 270 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 B3GNT2Q9NY97 397 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 SLCO1C1Q9NYB5 712 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 ZNF224Q9NZL3 707 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 LSM2Q9Y333 95 aaKnown RBP13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 CACNA1CQ13936 2221 aa13.83□□□□□ -0.2
TRAFD1-203ENST00000547063 UGT2B10P36537 528 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 RPL5P46777 297 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 FAM27E3Q08E93 113 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 PABPC1L2AQ5JQF8 200 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 XAF1Q6GPH4 301 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 ZNF485Q8NCK3 441 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 OR10S1Q8NGN2 331 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 GATAD2BQ8WXI9 593 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 RNASE6Q93091 150 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 MGLLQ99685 303 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 TTTY10Q9BZA0 68 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 ACTR6Q9GZN1 396 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 WNT5BQ9H1J7 359 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 SP140LQ9H930 580 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 PNRC2Q9NPJ4 139 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 MRM2Q9UI43 246 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms