RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 BCL2L2Q92843 193 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-211ENST00000546304 NABP1Q96AH0 204 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 OTULINQ96BN8 352 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 ZC3HAV1LQ96H79 300 aaKnown RBP5.52□□□□□ -1.53
PRKDC-211ENST00000546304 BOD1Q96IK1 185 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 DACH2Q96NX9 599 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 MUS81Q96NY9 551 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 FOXN4Q96NZ1 517 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 HCAR1Q9BXC0 346 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 NMNAT2Q9BZQ4 307 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 NUAK2Q9H093 628 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 VCX3BQ9H321 246 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 OBP2BQ9NPH6 170 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 HINT3Q9NQE9 182 aaKnown RBP5.52□□□□□ -1.53
PRKDC-211ENST00000546304 POLE4Q9NR33 117 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 SLC17A5Q9NRA2 495 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 IMPAD1Q9NX62 359 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 TVP23BQ9NYZ1 205 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 NDRG3Q9UGV2 375 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 POLR1DQ9Y2S0 133 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 AMDHD2Q9Y303 409 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 SLC25A15Q9Y619 301 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 COMMD3-BMI1R4GMX3 469 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 RAI1Q7Z5J4 1906 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-211ENST00000546304 PRR23D1E9PI22 279 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-211ENST00000546304 E9PQ18 207 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 DLGAP1O14490 977 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 UBL3O95164 117 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 HLA-HP01893 362 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 GYPBP06028 91 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 PRR23D2P0DMB1 279 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-211ENST00000546304 OR8G3PP0DMU2 310 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 CLUP10909 449 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 NPR2P20594 1047 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 CRYGSP22914 178 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 LAP3P28838 519 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 PYCR1P32322 319 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 GUCA1AP43080 201 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-211ENST00000546304 CENPAP49450 140 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 AQP4P55087 323 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 ETFDHQ16134 617 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 C1QTNF12Q5T7M4 302 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 CXXC5Q7LFL8 322 aaKnown RBP5.51□□□□□ -1.53
PRKDC-211ENST00000546304 DPPA2Q7Z7J5 298 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-211ENST00000546304 WDR31Q8NA23 367 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 BBS1Q8NFJ9 593 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 SLC26A10Q8NG04 563 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 OR51L1Q8NGJ5 315 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 TMEM163Q8TC26 289 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 NRG4Q8WWG1 115 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 CYGBQ8WWM9 190 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 HSD17B8Q92506 261 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 MUCL1Q96DR8 90 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 WFIKKN1Q96NZ8 548 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 DDOQ99489 341 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 SH3GL3Q99963 347 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 ADI1Q9BV57 179 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 MED20Q9H944 212 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 SEC61A2Q9H9S3 476 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 SIAEQ9HAT2 523 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 NOX3Q9HBY0 568 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 MOV10Q9HCE1 1003 aaKnown RBP5.51□□□□□ -1.53
PRKDC-211ENST00000546304 EMC7Q9NPA0 242 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 ZNF226Q9NYT6 803 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 ZNF224Q9NZL3 707 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 NPAP1Q9NZP6 1156 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 KCNN3Q9UGI6 736 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 NDRG4Q9ULP0 352 aaKnown RBP5.51□□□□□ -1.53
PRKDC-211ENST00000546304 B9D1Q9UPM9 204 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 GMPPBQ9Y5P6 360 aa5.51□□□□□ -1.53
PRKDC-211ENST00000546304 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-211ENST00000546304 CCDC182A6NF36 153 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 C12orf71A8MTZ7 269 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 FAM171A2A8MVW0 826 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 DEFB108AA8MXU0 73 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 SLC16A6O15403 523 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 RAB36O95755 333 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 GPANK1O95872 356 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 IGKV3-15P01624 115 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 HLA-DQA2P01906 255 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 HRGP04196 525 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 CELA3BP08861 270 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 CST2P09228 141 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 CD79AP11912 226 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 SLC2A5P22732 501 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 CAPGP40121 348 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 PTDSS1P48651 473 aaKnown RBP5.5□□□□□ -1.53
PRKDC-211ENST00000546304 ZNF83P51522 516 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 IDH3GP51553 393 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-211ENST00000546304 BLVRAP53004 296 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 NR1H2P55055 460 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 RPS7P62081 194 aaKnown RBP5.5□□□□□ -1.53
PRKDC-211ENST00000546304 SUMO1P63165 101 aaKnown RBP5.5□□□□□ -1.53
PRKDC-211ENST00000546304 HSF2Q03933 536 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 SCRN3Q0VDG4 424 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 AQP6Q13520 282 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 KEAP1Q14145 624 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 ENDOGQ14249 297 aaKnown RBP5.5□□□□□ -1.53
PRKDC-211ENST00000546304 SGCAQ16586 387 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms