RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 HHLA2Q9UM44 414 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 SESN1Q9Y6P5 492 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 RFPL4AA6NLU0 287 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 RFPL4AL1F8VTS6 287 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 H3BUI4 141 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 KCNAB3O43448 404 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 ZNF354AO60765 605 aaPredicted RBP14.14□□□□□ -0.15
LDLR-204ENST00000545707 SRSF10O75494 262 aaKnown RBP14.14□□□□□ -0.15
LDLR-204ENST00000545707 AHSA1O95433 338 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 PMS2P2O95744 297 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 FOLR1P15328 257 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 NME1P15531 152 aaKnown RBP14.14□□□□□ -0.15
LDLR-204ENST00000545707 ARL4DP49703 201 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 UBXN2BQ14CS0 331 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 ADGRE4PQ86SQ3 457 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 BVESQ8NE79 360 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 FGGYQ96C11 551 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 EMC6Q9BV81 110 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.14□□□□□ -0.15
LDLR-204ENST00000545707 VN1R1Q9GZP7 353 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 VDAC3Q9Y277 283 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 R4GMQ9 66 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 NUP210LQ5VU65 1888 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 UNC13CQ8NB66 2214 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 MS4A18H0YCH9 400 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 FADS1O60427 444 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 IGLV3-19P01714 112 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 ZNF823P16415 610 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 CD38P28907 300 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 CALCRP30988 508 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 ARHGDIBP52566 201 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 SLC26A5P58743 744 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 CFHR1Q03591 330 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 TAF13Q15543 124 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 OR7A5Q15622 319 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 MPPED2Q15777 294 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 MS4A18Q3C1V0 323 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 C3orf33Q6P1S2 294 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 ATRAIDQ6UW56 229 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 SLC29A4Q7RTT9 530 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 SLC51BQ86UW2 128 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 NAXDQ8IW45 347 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 TMEM185BQ9H7F4 350 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 COPS7AQ9UBW8 275 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 VSIG4Q9Y279 399 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 NOP16Q9Y3C1 178 aaKnown RBP14.13□□□□□ -0.15
LDLR-204ENST00000545707 OR5H14A6NHG9 310 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 RHPN2P1A8MT19 583 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 TRIM77I1YAP6 450 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 OPN1LWP04000 364 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 FGF2P09038 288 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 RPA2P15927 270 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 CDNFQ49AH0 187 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 RNF144BQ7Z419 303 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 GRINAQ7Z429 371 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 BOLLQ8N9W6 283 aaKnown RBP14.13□□□□□ -0.15
LDLR-204ENST00000545707 CHST4Q8NCG5 386 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 SLC26A10Q8NG04 563 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 OR1N1Q8NGS0 311 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 OR6K3Q8NGY3 331 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 CCDC107Q8WV48 283 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 DAZLQ92904 295 aaKnown RBP14.13□□□□□ -0.15
LDLR-204ENST00000545707 ZDHHC12Q96GR4 267 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 DPYSL5Q9BPU6 564 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 MICU1Q9BPX6 476 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 ALX4Q9H161 411 aaPredicted RBP14.13□□□□□ -0.15
LDLR-204ENST00000545707 PTGES2Q9H7Z7 377 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 CNTD2Q9H8S5 307 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 ZNF304Q9HCX3 659 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 UPB1Q9UBR1 384 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 CTSFQ9UBX1 484 aa14.13□□□□□ -0.15
LDLR-204ENST00000545707 A0A1W2PQD3 144 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 LDLRAD4O15165 306 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 HLA-AP01891 365 aaKnown RBP14.12□□□□□ -0.15
LDLR-204ENST00000545707 FBLP22087 321 aaKnown RBP14.12□□□□□ -0.15
LDLR-204ENST00000545707 GNALP38405 381 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 CXADRP78310 365 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 RHOUQ7L0Q8 258 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 ST7LQ8TDW4 575 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 NUDCD2Q8WVJ2 157 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 THRSPQ92748 146 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 ZNF75AQ96N20 296 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 NUDT22Q9BRQ3 303 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 PDCD10Q9BUL8 212 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 FOXQ1Q9C009 403 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 PLEKHA6Q9Y2H5 1048 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 IGHV1OR15-9A0A0B4J2B8 117 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 FAM25EA8MYX2 175 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 FTCDNL1E5RQL4 147 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 CRABP1P29762 137 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 PNLIPRP2P54317 469 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 FBXW4P57775 412 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 DCAF7P61962 342 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 POU3F1Q03052 451 aaPredicted RBP14.12□□□□□ -0.15
LDLR-204ENST00000545707 PAPD4Q6PIY7 484 aaKnown RBP14.12□□□□□ -0.15
LDLR-204ENST00000545707 ARSKQ6UWY0 536 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 FJX1Q86VR8 437 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 OR52N4Q8NGI2 321 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 OIT3Q8WWZ8 545 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 SPACA5Q96QH8 159 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms