RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 C17orf105B2RV13 164 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 SLC16A7O60669 478 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 DUS4LO95620 317 aaKnown RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 DCNP07585 359 aaKnown RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 CRABP1P29762 137 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 RABIFP47224 123 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 CX3CR1P49238 355 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 SLC37A1P57057 533 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 CXADRP78310 365 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 IL13RA1P78552 427 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 ZNF117Q03924 483 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 GLO1Q04760 184 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 GPM6BQ13491 265 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 MICBQ29980 383 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 ZNF260Q3ZCT1 412 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 C3orf33Q6P1S2 294 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 DEGS2Q6QHC5 323 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 Q6ZSR6 202 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 SPAG16Q8N0X2 631 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 JAGN1Q8N5M9 183 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 DTWD2Q8NBA8 298 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 AVL9Q8NBF6 648 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 SLC30A7Q8NEW0 376 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 FAM46BQ96A09 425 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 ZNF524Q96C55 264 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 PIK3IP1Q96FE7 263 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 PTDSS2Q9BVG9 487 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 NMES1Q9C002 83 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 CST11Q9H112 138 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 ASF1BQ9NVP2 202 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 GDF2Q9UK05 429 aaPredicted RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 DBX1A6NMT0 343 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 CCSO14618 274 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 DXOO77932 396 aaKnown RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 STK17BO94768 372 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 KLF8O95600 359 aaPredicted RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 BPNT1O95861 308 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 CRHP06850 196 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 CTLA4P16410 223 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 CYCSP99999 105 aaKnown RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 HHEXQ03014 270 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 ERV3-1Q14264 604 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 MOGAT2Q3SYC2 334 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 CDNFQ49AH0 187 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 LRRC37A5PQ49AS3 106 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 TMEM244Q5VVB8 128 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 DHRS7BQ6IAN0 325 aaPredicted RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 HAGHLQ6PII5 290 aaPredicted RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 CORO6Q6QEF8 472 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 C5orf46Q6UWT4 87 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 TRAPPC6BQ86SZ2 158 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 FJX1Q86VR8 437 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 PUSL1Q8N0Z8 303 aaKnown RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 OR4K17Q8NGC6 315 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 OR5AP2Q8NGF4 316 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 MRGPRFQ96AM1 343 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 TCTN2Q96GX1 697 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 NXF5Q9H1B4 397 aaKnown RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 SAV1Q9H4B6 383 aaPredicted RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 G6PC2Q9NQR9 355 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 MBD2Q9UBB5 411 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 FBLN5Q9UBX5 448 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 MLXQ9UH92 298 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 DCDC2BA2VCK2 349 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 C11orf98E9PRG8 122 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 H0YIG0 161 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 RAB27BO00194 218 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 GPR31O00270 319 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 ZNF208O43345 1280 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 RAD1O60671 282 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 NPIPB7O75200 414 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 CD79AP11912 226 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 HOXB1P14653 301 aaPredicted RBP7.84□□□□□ -1.15
TDP1-204ENST00000545686 PGCP20142 388 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 PSMB6P28072 239 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 HSD11B1P28845 292 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 DCAF7P61962 342 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 DCDP81605 110 aaKnown RBP7.84□□□□□ -1.15
TDP1-204ENST00000545686 TOMM34Q15785 309 aaPredicted RBP7.84□□□□□ -1.15
TDP1-204ENST00000545686 PCK2Q16822 640 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 DRAM2Q6UX65 266 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 IL34Q6ZMJ4 242 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 GTPBP8Q8N3Z3 284 aaPredicted RBP7.84□□□□□ -1.15
TDP1-204ENST00000545686 FAM160A2Q8N612 972 aaPredicted RBP7.84□□□□□ -1.15
TDP1-204ENST00000545686 OR51A2Q8NGJ7 313 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 RNF141Q8WVD5 230 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 SEC22AQ96IW7 307 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 MRGPRX1Q96LB2 322 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 UQCC2Q9BRT2 126 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 CHMP1AQ9HD42 196 aaPredicted RBP7.84□□□□□ -1.15
TDP1-204ENST00000545686 ZNF629Q9UEG4 869 aaPredicted RBP7.84□□□□□ -1.15
TDP1-204ENST00000545686 OR52A1Q9UKL2 312 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 MKL2Q9ULH7 1088 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 MMACHCQ9Y4U1 282 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 A0A0C4DFX4 3053 aa7.84□□□□□ -1.15
TDP1-204ENST00000545686 ZNF98A6NK75 572 aa7.84□□□□□ -1.16
TDP1-204ENST00000545686 SIGLEC5O15389 551 aa7.84□□□□□ -1.16
TDP1-204ENST00000545686 HCRTR2O43614 444 aa7.84□□□□□ -1.16
TDP1-204ENST00000545686 ICOSLGO75144 302 aa7.84□□□□□ -1.16
TDP1-204ENST00000545686 SNAPINO95295 136 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms