RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 PRMT9Q6P2P2 845 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 ZNF880Q6PDB4 577 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 C16orf87Q6PH81 154 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 NPSR1Q6W5P4 371 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 CTAGE6Q86UF2 777 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 PRSS58Q8IYP2 241 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 LYPD1Q8N2G4 141 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 CT45A3Q8NHU0 189 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 ANKRA2Q9H9E1 313 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 TMEM9BQ9NQ34 198 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 MTCH1Q9NZJ7 389 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 CAB39Q9Y376 341 aaPredicted RBP3.01□□□□□ -1.93
COPA-206ENST00000545266 WIF1Q9Y5W5 379 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 DENND4AQ7Z401 1863 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 TUBGCP6Q96RT7 1819 aa3□□□□□ -1.93
COPA-206ENST00000545266 WDR19Q8NEZ3 1342 aa3□□□□□ -1.93
COPA-206ENST00000545266 IGLV2-18A0A075B6J9 118 aa3□□□□□ -1.93
COPA-206ENST00000545266 TRAV40A0A0B4J280 105 aa3□□□□□ -1.93
COPA-206ENST00000545266 SCAMP2O15127 329 aaKnown RBP3□□□□□ -1.93
COPA-206ENST00000545266 RAD51BO15315 384 aa3□□□□□ -1.93
COPA-206ENST00000545266 WBP4O75554 376 aaKnown RBP3□□□□□ -1.93
COPA-206ENST00000545266 RBBP9O75884 186 aa3□□□□□ -1.93
COPA-206ENST00000545266 RCBTB2O95199 551 aa3□□□□□ -1.93
COPA-206ENST00000545266 CD3GP09693 182 aa3□□□□□ -1.93
COPA-206ENST00000545266 PABPC4LP0CB38 370 aaKnown RBP3□□□□□ -1.93
COPA-206ENST00000545266 UBTFL6P0CB48 400 aaPredicted RBP3□□□□□ -1.93
COPA-206ENST00000545266 SRSF5Q13243 272 aaKnown RBP3□□□□□ -1.93
COPA-206ENST00000545266 MRPL23Q16540 153 aaKnown RBP3□□□□□ -1.93
COPA-206ENST00000545266 CHRFAM7AQ494W8 412 aa3□□□□□ -1.93
COPA-206ENST00000545266 HSP90AB3PQ58FF7 597 aa3□□□□□ -1.93
COPA-206ENST00000545266 METAP1DQ6UB28 335 aaPredicted RBP3□□□□□ -1.93
COPA-206ENST00000545266 SLC16A14Q7RTX9 510 aa3□□□□□ -1.93
COPA-206ENST00000545266 RNF182Q8N6D2 247 aa3□□□□□ -1.93
COPA-206ENST00000545266 NECAP1Q8NC96 275 aa3□□□□□ -1.93
COPA-206ENST00000545266 OR4A4PQ8NGN8 299 aa3□□□□□ -1.93
COPA-206ENST00000545266 OR8U1Q8NH10 309 aa3□□□□□ -1.93
COPA-206ENST00000545266 OR5B3Q8NH48 314 aa3□□□□□ -1.93
COPA-206ENST00000545266 COQ8AQ8NI60 647 aa3□□□□□ -1.93
COPA-206ENST00000545266 SYNPRQ8TBG9 265 aa3□□□□□ -1.93
COPA-206ENST00000545266 PIFOQ8TCI5 191 aa3□□□□□ -1.93
COPA-206ENST00000545266 NEURL3Q96EH8 262 aa3□□□□□ -1.93
COPA-206ENST00000545266 OR10C1Q96KK4 312 aa3□□□□□ -1.93
COPA-206ENST00000545266 OSBPL11Q9BXB4 747 aa3□□□□□ -1.93
COPA-206ENST00000545266 ANKRD60Q9BZ19 345 aa3□□□□□ -1.93
COPA-206ENST00000545266 MARCOQ9UEW3 520 aaPredicted RBP3□□□□□ -1.93
COPA-206ENST00000545266 NUP214P35658 2090 aaPredicted RBP3□□□□□ -1.93
COPA-206ENST00000545266 TTC41PQ6P2S7 1318 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 SMCO3A2RU48 225 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 SERPINE3A8MV23 424 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 SMKR1H3BMG3 65 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 EIF4E2O60573 245 aaKnown RBP2.99□□□□□ -1.93
COPA-206ENST00000545266 ERLIN1O75477 346 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 CLDN11O75508 207 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 H6PDO95479 791 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 KRT14P02533 472 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 APCSP02743 223 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 FTH1P02794 183 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 ACSM4P0C7M7 580 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 CELP19835 753 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 RAB3AP20336 220 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 SSTR5P35346 364 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 CX3CR1P49238 355 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 VSX2P58304 361 aaPredicted RBP2.99□□□□□ -1.93
COPA-206ENST00000545266 STXBP1P61764 594 aaKnown RBP2.99□□□□□ -1.93
COPA-206ENST00000545266 SELENBP1Q13228 472 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 COX19Q49B96 90 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 CAVIN4Q5BKX8 364 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 PPM1LQ5SGD2 360 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 PRAMEF20Q5VT98 475 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 SCD5Q86SK9 330 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 CDKL3Q8IVW4 592 aaPredicted RBP2.99□□□□□ -1.93
COPA-206ENST00000545266 ZFP41Q8N8Y5 198 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 OR10AD1Q8NGE0 317 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 AGR3Q8TD06 166 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 C17orf50Q8WW18 174 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 LINC00477Q96M19 166 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 ZNF382Q96SR6 550 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 SPNS1Q9H2V7 528 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 CRLF2Q9HC73 371 aa2.99□□□□□ -1.93
COPA-206ENST00000545266 SAMSN1Q9NSI8 373 aaKnown RBP2.99□□□□□ -1.93
COPA-206ENST00000545266 CCDC59Q9P031 241 aaKnown RBP2.99□□□□□ -1.93
COPA-206ENST00000545266 TSSC4Q9Y5U2 329 aaPredicted RBP2.99□□□□□ -1.93
COPA-206ENST00000545266 IGHV1OR15-9A0A0B4J2B8 117 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 LRRIQ4A6NIV6 560 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 FKBP6O75344 327 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 CCNKO75909 580 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 HLA-DQA1P01909 254 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 CD74P04233 296 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 ASGR1P07306 291 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 POLR2MP0CAP2 368 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 DTYMKP23919 212 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 OPRK1P41145 380 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 UBE2NP61088 152 aaKnown RBP2.98□□□□□ -1.93
COPA-206ENST00000545266 DMTNQ08495 405 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 ZNF816Q0VGE8 651 aaPredicted RBP2.98□□□□□ -1.93
COPA-206ENST00000545266 HSDL1Q3SXM5 330 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 SOHLH1Q5JUK2 328 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 CARD17Q5XLA6 110 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 SLC16A13Q7RTY0 426 aa2.98□□□□□ -1.93
COPA-206ENST00000545266 CALHM1Q8IU99 346 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms