RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 NGFP01138 241 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 IFNGP01579 166 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 GIFP27352 417 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 CBX1P83916 185 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 GGTLC2Q14390 218 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 TMEM249Q2WGJ8 235 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 MBNL2Q5VZF2 373 aaKnown RBP13.46□□□□□ -0.25
CCDC78-216ENST00000544996 RFPL4BQ6ZWI9 263 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 CYB561A3Q8NBI2 242 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 PROKR2Q8NFJ6 384 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 OR2AJ1Q8NGZ0 328 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 KLF14Q8TD94 323 aaPredicted RBP13.46□□□□□ -0.25
CCDC78-216ENST00000544996 COG8Q96MW5 612 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 NIPSNAP1Q9BPW8 284 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 HDHD2Q9H0R4 259 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 FN3KQ9H479 309 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 ZNF556Q9HAH1 456 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 PDP1Q9P0J1 537 aaPredicted RBP13.46□□□□□ -0.25
CCDC78-216ENST00000544996 DNAJB9Q9UBS3 223 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 ATPIF1Q9UII2 106 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 GRIP1Q9Y3R0 1128 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 ARFGEF3Q5TH69 2177 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 OR6C6A6NF89 314 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 RIIAD1A6NNX1 92 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 TLX2O43763 284 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-216ENST00000544996 RRP9O43818 475 aaKnown RBP13.45□□□□□ -0.26
CCDC78-216ENST00000544996 CD5LO43866 347 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 TFP02787 698 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 ZNF823P16415 610 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 LIPAP38571 399 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 ERFP50548 548 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 KRTAP1-1Q07627 177 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 CCDC92Q53HC0 331 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-216ENST00000544996 ELFN2Q5R3F8 820 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 PAPD5Q8NDF8 572 aaKnown RBP13.45□□□□□ -0.26
CCDC78-216ENST00000544996 IPCEF1Q8WWN9 437 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-216ENST00000544996 RDH5Q92781 318 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 DCLRE1CQ96SD1 692 aaKnown RBP13.45□□□□□ -0.26
CCDC78-216ENST00000544996 BPESC1Q9GZL8 116 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 CYSLTR2Q9NS75 346 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 ARMC1Q9NVT9 282 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 CGGBP1Q9UFW8 167 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-216ENST00000544996 KCNG2Q9UJ96 466 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 LHFPL6Q9Y693 200 aa13.45□□□□□ -0.26
CCDC78-216ENST00000544996 HPXP02790 462 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 ANXA8P13928 327 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 ZNF3P17036 446 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 HOXB4P17483 251 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-216ENST00000544996 MPV17P39210 176 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 RGS6P49758 472 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 HIST1H3AP68431 136 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 MRPS11P82912 194 aaKnown RBP13.44□□□□□ -0.26
CCDC78-216ENST00000544996 ECH1Q13011 328 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 ZMAT1Q5H9K5 638 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 ZNF362Q5T0B9 420 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-216ENST00000544996 HIST2H3PS2Q5TEC6 136 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 CYB5R2Q6BCY4 276 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 CORO6Q6QEF8 472 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 HIST2H3AQ71DI3 136 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 TMEM179BQ7Z7N9 219 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 SLC37A3Q8NCC5 494 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 OR5L1Q8NGL2 311 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 OR4Q3Q8NH05 313 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 SLC7A6Q92536 515 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 DDOQ99489 341 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 PITX2Q99697 317 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 COQ7Q99807 217 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 CHODLQ9H9P2 273 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 DECR2Q9NUI1 292 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 NKIRAS2Q9NYR9 191 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 CYB5R1Q9UHQ9 305 aa13.44□□□□□ -0.26
CCDC78-216ENST00000544996 INAFM1C9JVW0 142 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 LYNX1G3V0Z9 82 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 J3QW42 95 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 TPD52L2O43399 206 aaKnown RBP13.43□□□□□ -0.26
CCDC78-216ENST00000544996 DEAF1O75398 565 aaPredicted RBP13.43□□□□□ -0.26
CCDC78-216ENST00000544996 LYNX1P0DP58 116 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 ACHEP22303 614 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 POU1F1P28069 291 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 PYCR1P32322 319 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 MAGEB1P43366 347 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 GZMKP49863 264 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 ZNF81P51508 661 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 BLVRAP53004 296 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 SLC25A1P53007 311 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 CCL8P80075 99 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 DBPQ10586 325 aaPredicted RBP13.43□□□□□ -0.26
CCDC78-216ENST00000544996 CRMP1Q14194 572 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 C1orf146Q5VVC0 180 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 SLC18B1Q6NT16 456 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 LINC00346Q8IVM7 164 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 ATG16L2Q8NAA4 619 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 OR9Q1Q8NGQ5 310 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 POM121Q96HA1 1249 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 RBM4Q9BWF3 364 aaKnown RBP13.43□□□□□ -0.26
CCDC78-216ENST00000544996 YAE1D1Q9NRH1 226 aa13.43□□□□□ -0.26
CCDC78-216ENST00000544996 SETD2Q9BYW2 2564 aaPredicted RBP13.43□□□□□ -0.26
CCDC78-216ENST00000544996 IGHV4-61A0A0C4DH41 118 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 TIMM8AO60220 97 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-216ENST00000544996 DBHP09172 617 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms