RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 SPATA3Q8NHX4 192 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 KLF14Q8TD94 323 aaPredicted RBP10.11□□□□□ -0.79
HDAC4-216ENST00000544989 MARS2Q96GW9 593 aaKnown RBP10.11□□□□□ -0.79
HDAC4-216ENST00000544989 NMNAT3Q96T66 252 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 CHID1Q9BWS9 393 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 CDADC1Q9BWV3 514 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 BPESC1Q9GZL8 116 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 YAE1D1Q9NRH1 226 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 DECR2Q9NUI1 292 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 TBC1D23Q9NUY8 699 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 MYEF2Q9P2K5 600 aaKnown RBP10.11□□□□□ -0.79
HDAC4-216ENST00000544989 ASH2LQ9UBL3 628 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 LPAR3Q9UBY5 353 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 KLHL21Q9UJP4 597 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 ZDHHC8Q9ULC8 765 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 SONP18583 2426 aaKnown RBP10.1□□□□□ -0.79
HDAC4-216ENST00000544989 IGLV1-36A0A0B4J1U3 117 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 BHLHE40O14503 412 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 GNGT2O14610 69 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 CLPTM1O96005 669 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 GASTP01350 101 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 IFNGP01579 166 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 SCG5P05408 212 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 IGFBP1P08833 259 aaPredicted RBP10.1□□□□□ -0.79
HDAC4-216ENST00000544989 TACSTD2P09758 323 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 GAAP10253 952 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 NAT2P11245 290 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 ZNF81P51508 661 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 BLVRAP53004 296 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 ERVS71-1P61550 626 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDAC4-216ENST00000544989 MAD2L1BPQ15013 274 aaPredicted RBP10.1□□□□□ -0.79
HDAC4-216ENST00000544989 FAM166AQ6J272 317 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 ZNF101Q8IZC7 436 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 OR6V1Q8N148 313 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 LNX2Q8N448 690 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 OR2T33Q8NG76 320 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 OR9Q2Q8NGE9 314 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 OR2AJ1Q8NGZ0 328 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 SLC25A40Q8TBP6 338 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 CLPTM1LQ96KA5 538 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 COQ7Q99807 217 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 OR2J1Q9GZK6 312 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 EGLN1Q9GZT9 426 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 SRA1Q9HD15 236 aaKnown RBP10.1□□□□□ -0.79
HDAC4-216ENST00000544989 RPRD1BQ9NQG5 326 aaKnown RBP10.1□□□□□ -0.79
HDAC4-216ENST00000544989 CDC42EP3Q9UKI2 254 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 GRIP1Q9Y3R0 1128 aa10.1□□□□□ -0.79
HDAC4-216ENST00000544989 IFNA2P01563 188 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 HLA-DQA2P01906 255 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 ADH4P08319 380 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 IGHV4-31P0DP07 118 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 ZNF823P16415 610 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 PCMT1P22061 227 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 TNFSF4P23510 183 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 GPR6P46095 362 aaPredicted RBP10.09□□□□□ -0.79
HDAC4-216ENST00000544989 HIST1H3AP68431 136 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 SLC3A1Q07837 685 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 CLEC12AQ5QGZ9 265 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 ELFN2Q5R3F8 820 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 HIST2H3PS2Q5TEC6 136 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 RFPL4BQ6ZWI9 263 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 HIST2H3AQ71DI3 136 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 ADGRG5Q8IZF4 528 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 SDR9C7Q8NEX9 313 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 PROKR2Q8NFJ6 384 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 SLC26A10Q8NG04 563 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 OR10G2Q8NGC3 310 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 OR52E2Q8NGJ4 325 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 TEX47Q8TBZ9 253 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 GIPC3Q8TF64 312 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 CANT1Q8WVQ1 401 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 PTP4A1Q93096 173 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 APOBEC3DQ96AK3 386 aaPredicted RBP10.09□□□□□ -0.79
HDAC4-216ENST00000544989 ELMOD3Q96FG2 381 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 TSSK6Q9BXA6 273 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 TEX12Q9BXU0 123 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 MMADHCQ9H3L0 296 aaPredicted RBP10.09□□□□□ -0.79
HDAC4-216ENST00000544989 EGLN3Q9H6Z9 239 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 ZNF556Q9HAH1 456 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 SAP30LQ9HAJ7 183 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 KCNS2Q9ULS6 477 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 U3KQV3 271 aa10.09□□□□□ -0.79
HDAC4-216ENST00000544989 IGHV4-61A0A0C4DH41 118 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 OR6C68A6NDL8 312 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 RIIAD1A6NNX1 92 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 RER1O15258 196 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 TPD52L2O43399 206 aaKnown RBP10.08□□□□□ -0.8
HDAC4-216ENST00000544989 TIMM8AO60220 97 aaPredicted RBP10.08□□□□□ -0.8
HDAC4-216ENST00000544989 E2F6O75461 281 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 MPZL1O95297 269 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 TFP02787 698 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 HPXP02790 462 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 RAC2P15153 192 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 ZNF3P17036 446 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 HNF1AP20823 631 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 KITLGP21583 273 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 CRYBB2P43320 205 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 MMP15P51511 669 aa10.08□□□□□ -0.8
HDAC4-216ENST00000544989 SLC25A1P53007 311 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms