RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 BRICD5Q6PL45 260 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 LRRN1Q6UXK5 716 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 UNQ6126/PRO20091Q6UXV3 157 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 NKAIN4Q8IVV8 208 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 FITM2Q8N6M3 262 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 ABHD4Q8TB40 342 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 TPD52L3Q96J77 140 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 SLC19A3Q9BZV2 496 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 WNT5BQ9H1J7 359 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 SPAG4Q9NPE6 437 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 TAGLN3Q9UI15 199 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 TMEM178BH3BS89 294 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 IFNA14P01570 189 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 TSPAN19P0C672 248 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 ACADSP16219 412 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 NCK1P16333 377 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 TNFRSF1AP19438 455 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 ERVK-25P63136 954 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 RPL18Q07020 188 aaKnown RBP10.72□□□□□ -0.69
USP28-212ENST00000544750 PIN1Q13526 163 aaPredicted RBP10.72□□□□□ -0.69
USP28-212ENST00000544750 ARMC4Q5T2S8 1044 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 FAM27BQ5VT28 67 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 TTC33Q6PID6 262 aaPredicted RBP10.72□□□□□ -0.69
USP28-212ENST00000544750 FIP1L1Q6UN15 594 aaKnown RBP10.72□□□□□ -0.69
USP28-212ENST00000544750 Q6YL49 198 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 CBLL1Q75N03 491 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 TSEN54Q7Z6J9 526 aaKnown RBP10.72□□□□□ -0.69
USP28-212ENST00000544750 MUC20Q8N307 709 aaPredicted RBP10.72□□□□□ -0.69
USP28-212ENST00000544750 FAM156AQ8NDB6 213 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 OR10S1Q8NGN2 331 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 ITLN1Q8WWA0 313 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 RAB40AQ8WXH6 277 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 MPP4Q96JB8 637 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 KCTD14Q9BQ13 255 aaPredicted RBP10.72□□□□□ -0.69
USP28-212ENST00000544750 SSBP3Q9BWW4 388 aaPredicted RBP10.72□□□□□ -0.69
USP28-212ENST00000544750 CHIAQ9BZP6 476 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 OR2H1Q9GZK4 316 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 KCNN2Q9H2S1 579 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 POFUT1Q9H488 388 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 SMURF2Q9HAU4 748 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 TMEM165Q9HC07 324 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 CCNB1IP1Q9NPC3 277 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 MEPEQ9NQ76 525 aaPredicted RBP10.72□□□□□ -0.69
USP28-212ENST00000544750 IL19Q9UHD0 177 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 A4GNTQ9UNA3 340 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 SNX13Q9Y5W8 968 aa10.72□□□□□ -0.69
USP28-212ENST00000544750 KIR2DS1A0A191URI9 304 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 NDUFAB1O14561 156 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 CLPXO76031 633 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 OR5F1O95221 314 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 SERPINA1P01009 418 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 F13BP05160 661 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 KITLGP21583 273 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 FMODQ06828 376 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 KRT72Q14CN4 511 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 RYR3Q15413 4870 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 SLC25A47Q6Q0C1 308 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 BTNL3Q6UXE8 466 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 BRD3OSQ6XYD6 125 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 NANOGNBQ7Z5D8 188 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 ZER1Q7Z7L7 766 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 C1QL4Q86Z23 238 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 PGAM4Q8N0Y7 254 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 TMEM86BQ8N661 226 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 RNF148Q8N7C7 305 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 PFN4Q8NHR9 129 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 TMEM255BQ8WV15 326 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 HDAC2Q92769 488 aaKnown RBP10.71□□□□□ -0.69
USP28-212ENST00000544750 C4orf45Q96LM5 186 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 PRRC1Q96M27 445 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 POLR2J2Q9GZM3 115 aaKnown RBP10.71□□□□□ -0.69
USP28-212ENST00000544750 POLR2J3Q9H1A7 115 aaKnown RBP10.71□□□□□ -0.69
USP28-212ENST00000544750 MARCH7Q9H992 704 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 ELOVL3Q9HB03 270 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 GCM1Q9NP62 436 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 NOX4Q9NPH5 578 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 MAN2C1Q9NTJ4 1040 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 CD300AQ9UGN4 299 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 RIMS3Q9UJD0 308 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 PPP1R3CQ9UQK1 317 aa10.71□□□□□ -0.69
USP28-212ENST00000544750 TET2Q6N021 2002 aaPredicted RBP10.7□□□□□ -0.7
USP28-212ENST00000544750 A0A1W2PRG6 482 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 SLC22A31A6NKX4 558 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 BLOC1S5-TXNDC5H3BN57 136 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 J3KTA2 159 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 KPNA4O00629 521 aaPredicted RBP10.7□□□□□ -0.7
USP28-212ENST00000544750 FFAR1O14842 300 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 GSTA4O15217 222 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 TIMM8AO60220 97 aaPredicted RBP10.7□□□□□ -0.7
USP28-212ENST00000544750 ZNF682O95780 498 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 TSPAN15O95858 294 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 CST2P09228 141 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 THRBP10828 461 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 HSD17B1P14061 328 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 MMP16P51512 607 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 PROK1P58294 105 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 TAS2R41P59536 307 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 BPIFB3P59826 476 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 RPL15P61313 204 aaKnown RBP10.7□□□□□ -0.7
USP28-212ENST00000544750 HLXQ14774 488 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms