RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ARF1P84077 181 aaKnown RBP26.73■■□□□ 1.87
CCM2-219ENST00000544363 FAPQ12884 760 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 FBXW9Q5XUX1 488 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 ZNF813Q6ZN06 617 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 PRSS35Q8N3Z0 413 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 MBD3L2Q8NHZ7 208 aaPredicted RBP26.73■■□□□ 1.87
CCM2-219ENST00000544363 C4orf45Q96LM5 186 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 KCTD7Q96MP8 289 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 SLC25A18Q9H1K4 315 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 MALT1Q9UDY8 824 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 ZNF281Q9Y2X9 895 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 R4GMQ9 66 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 CHD8Q9HCK8 2581 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 PRRC2CQ9Y520 2896 aaKnown RBP26.73■■□□□ 1.87
CCM2-219ENST00000544363 PNPP00491 289 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 SERPINA3P01011 423 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 ABOP16442 354 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 CCR9P51686 369 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 RTL6Q6ICC9 239 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 ZNF544Q6NX49 715 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 ZNF627Q7L945 461 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 OR5AK2Q8NH90 309 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 KCNN2Q9H2S1 579 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 OR4C45A6NMZ5 311 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 SC5DO75845 299 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 KLRB1Q12918 225 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 WDR38Q5JTN6 314 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 C1orf185Q5T7R7 199 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 KLHL24Q6TFL4 600 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 CATSPERDQ86XM0 798 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 TSC22D3Q99576 134 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 NIPAL2Q9H841 368 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 ASF1BQ9NVP2 202 aa26.72■■□□□ 1.87
CCM2-219ENST00000544363 ARHGAP21Q5T5U3 1957 aa26.71■■□□□ 1.87
CCM2-219ENST00000544363 TMEM212A6NML5 194 aa26.71■■□□□ 1.87
CCM2-219ENST00000544363 FARS2O95363 451 aaKnown RBP26.71■■□□□ 1.87
CCM2-219ENST00000544363 KIR2DL2P43627 348 aaPredicted RBP26.71■■□□□ 1.87
CCM2-219ENST00000544363 KIR3DL2P43630 455 aa26.71■■□□□ 1.87
CCM2-219ENST00000544363 FOXG1P55316 489 aaPredicted RBP26.71■■□□□ 1.87
CCM2-219ENST00000544363 RPS11P62280 158 aaKnown RBP eCLIP26.71■■□□□ 1.87
CCM2-219ENST00000544363 MFGE8Q08431 387 aaPredicted RBP26.71■■□□□ 1.87
CCM2-219ENST00000544363 TAF13Q15543 124 aa26.71■■□□□ 1.87
CCM2-219ENST00000544363 PRR30Q53SZ7 412 aaPredicted RBP26.71■■□□□ 1.87
CCM2-219ENST00000544363 SEM1Q6ZVN7 128 aa26.71■■□□□ 1.87
CCM2-219ENST00000544363 SYT9Q86SS6 491 aa26.71■■□□□ 1.87
CCM2-219ENST00000544363 OR13C5Q8NGS8 318 aa26.71■■□□□ 1.87
CCM2-219ENST00000544363 DDX28Q9NUL7 540 aaKnown RBP26.71■■□□□ 1.87
CCM2-219ENST00000544363 GALNT8Q9NY28 637 aa26.71■■□□□ 1.87
CCM2-219ENST00000544363 DOCK7Q96N67 2140 aa26.71■■□□□ 1.87
CCM2-219ENST00000544363 PIEZO2Q9H5I5 2752 aa26.71■■□□□ 1.87
CCM2-219ENST00000544363 HOXD4P09016 255 aaPredicted RBP26.7■■□□□ 1.86
CCM2-219ENST00000544363 ZNF829Q3KNS6 432 aaPredicted RBP26.7■■□□□ 1.86
CCM2-219ENST00000544363 ACSM3Q53FZ2 586 aa26.7■■□□□ 1.86
CCM2-219ENST00000544363 CCDC92Q53HC0 331 aaPredicted RBP26.7■■□□□ 1.86
CCM2-219ENST00000544363 YIF1BQ5BJH7 314 aa26.7■■□□□ 1.86
CCM2-219ENST00000544363 C9orf135Q5VTT2 229 aa26.7■■□□□ 1.86
CCM2-219ENST00000544363 TFAP2EQ6VUC0 442 aa26.7■■□□□ 1.86
CCM2-219ENST00000544363 SKA3Q8IX90 412 aa26.7■■□□□ 1.86
CCM2-219ENST00000544363 COMMD4Q9H0A8 199 aa26.7■■□□□ 1.86
CCM2-219ENST00000544363 FAM215AQ9Y5M1 114 aa26.7■■□□□ 1.86
CCM2-219ENST00000544363 TMEM269A0A1B0GVZ9 245 aa26.69■■□□□ 1.86
CCM2-219ENST00000544363 HSD11B1P28845 292 aa26.69■■□□□ 1.86
CCM2-219ENST00000544363 MMP16P51512 607 aa26.69■■□□□ 1.86
CCM2-219ENST00000544363 GRB2P62993 217 aaKnown RBP26.69■■□□□ 1.86
CCM2-219ENST00000544363 GFRALQ6UXV0 394 aa26.69■■□□□ 1.86
CCM2-219ENST00000544363 SLC16A14Q7RTX9 510 aa26.69■■□□□ 1.86
CCM2-219ENST00000544363 CNEP1R1Q8N9A8 125 aa26.69■■□□□ 1.86
CCM2-219ENST00000544363 IL17RDQ8NFM7 739 aa26.69■■□□□ 1.86
CCM2-219ENST00000544363 OR6K3Q8NGY3 331 aa26.69■■□□□ 1.86
CCM2-219ENST00000544363 WACQ9BTA9 647 aa26.69■■□□□ 1.86
CCM2-219ENST00000544363 GTF2A1LQ9UNN4 478 aa26.69■■□□□ 1.86
CCM2-219ENST00000544363 LOC110117498-PIK3R3F6TDL0 507 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 DVL2O14641 736 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 MPGP29372 298 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 PCBD1P61457 104 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 SCRN3Q0VDG4 424 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 DGUOKQ16854 277 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 ELFN2Q5R3F8 820 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 CEACAM19Q7Z692 300 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 ZNF676Q8N7Q3 588 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 RGP1Q92546 391 aaPredicted RBP26.68■■□□□ 1.86
CCM2-219ENST00000544363 SLC22A13Q9Y226 551 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 SLC5A6Q9Y289 635 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 PER3P56645 1201 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 ATF6BQ99941 703 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 G6PC2Q9NQR9 355 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 FAM206AQ9NX38 181 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 PLEK2Q9NYT0 353 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 OR52A1Q9UKL2 312 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 TIMM10BQ9Y5J6 103 aa26.68■■□□□ 1.86
CCM2-219ENST00000544363 SFTPCP11686 197 aa26.67■■□□□ 1.86
CCM2-219ENST00000544363 ZNF32P17041 273 aa26.67■■□□□ 1.86
CCM2-219ENST00000544363 CTSSP25774 331 aa26.67■■□□□ 1.86
CCM2-219ENST00000544363 SH3BGRP55822 239 aaPredicted RBP26.67■■□□□ 1.86
CCM2-219ENST00000544363 FOXF2Q12947 444 aa26.67■■□□□ 1.86
CCM2-219ENST00000544363 PAMR1Q6UXH9 720 aa26.67■■□□□ 1.86
CCM2-219ENST00000544363 PRRG2O14669 202 aa26.66■■□□□ 1.86
CCM2-219ENST00000544363 SGCEO43556 437 aa26.66■■□□□ 1.86
CCM2-219ENST00000544363 GATBO75879 557 aaKnown RBP26.66■■□□□ 1.86
CCM2-219ENST00000544363 CDRT1O95170 752 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms