RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 YIPF7Q8N8F6 280 aa10.38□□□□□ -0.75
DDB1-223ENST00000543658 OR1J2Q8NGS2 313 aa10.38□□□□□ -0.75
DDB1-223ENST00000543658 AKR7LQ8NHP1 331 aa10.38□□□□□ -0.75
DDB1-223ENST00000543658 SPTSSAQ969W0 71 aa10.38□□□□□ -0.75
DDB1-223ENST00000543658 MND1Q9BWT6 205 aa10.38□□□□□ -0.75
DDB1-223ENST00000543658 VCX3AQ9NNX9 186 aa10.38□□□□□ -0.75
DDB1-223ENST00000543658 FKBP14Q9NWM8 211 aa10.38□□□□□ -0.75
DDB1-223ENST00000543658 ERVK-18Q9QC07 812 aa10.38□□□□□ -0.75
DDB1-223ENST00000543658 GNG8Q9UK08 70 aa10.38□□□□□ -0.75
DDB1-223ENST00000543658 COPS3Q9UNS2 423 aa10.38□□□□□ -0.75
DDB1-223ENST00000543658 ZNF462Q96JM2 2506 aa10.38□□□□□ -0.75
DDB1-223ENST00000543658 OR6C6A6NF89 314 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 TUBAL3A6NHL2 446 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 M0R1B8 84 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 CASKO14936 926 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 APOC1P02654 83 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 MMP7P09237 267 aaPredicted RBP10.37□□□□□ -0.75
DDB1-223ENST00000543658 COX5BP10606 129 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 CBR1P16152 277 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 CCNOP22674 350 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 GDI2P50395 445 aaKnown RBP10.37□□□□□ -0.75
DDB1-223ENST00000543658 IDH3GP51553 393 aaPredicted RBP10.37□□□□□ -0.75
DDB1-223ENST00000543658 PSG4Q00888 419 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 ZNF85Q03923 595 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 GALEQ14376 348 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 RAB39AQ14964 217 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 CDSNQ15517 529 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 TAB1Q15750 504 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 ZNF829Q3KNS6 432 aaPredicted RBP10.37□□□□□ -0.75
DDB1-223ENST00000543658 ZNF544Q6NX49 715 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 LRRN1Q6UXK5 716 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 VASH1Q7L8A9 365 aaPredicted RBP10.37□□□□□ -0.75
DDB1-223ENST00000543658 PRSS48Q7RTY5 328 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 ZNF283Q8N7M2 679 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 WDR31Q8NA23 367 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 OR1F12Q8NHA8 337 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 FGFBP3Q8TAT2 258 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 ST7LQ8TDW4 575 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 RNF133Q8WVZ7 376 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 MAP6Q96JE9 813 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 OR8B4Q96RC9 309 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 COQ7Q99807 217 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 JAM3Q9BX67 310 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 C1QTNF6Q9BXI9 259 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 WNT5BQ9H1J7 359 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 DUSP21Q9H596 190 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 NIPAL2Q9H841 368 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 CDH20Q9HBT6 801 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 PAK1IP1Q9NWT1 392 aaPredicted RBP10.37□□□□□ -0.75
DDB1-223ENST00000543658 ERVK13-1Q9NX77 482 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 ZNF224Q9NZL3 707 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 ATPIF1Q9UII2 106 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 CAB39Q9Y376 341 aaPredicted RBP10.37□□□□□ -0.75
DDB1-223ENST00000543658 SLC25A15Q9Y619 301 aa10.37□□□□□ -0.75
DDB1-223ENST00000543658 CFAP46Q8IYW2 2715 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 A0A087WXM4 84 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 MAGEA13PA6NCF6 341 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 METTL15A6NJ78 407 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 J3QLW9 94 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 PSMD9O00233 223 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 ZNF254O75437 659 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 SULT1C4O75897 302 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 MT-ND2P03891 347 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 MT-ND5P03915 603 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 RPSAP08865 295 aaKnown RBP10.36□□□□□ -0.75
DDB1-223ENST00000543658 PSKH1P11801 424 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 ZNF19P17023 458 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 STOMP27105 288 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 APEX1P27695 318 aaKnown RBP10.36□□□□□ -0.75
DDB1-223ENST00000543658 GRNP28799 593 aaKnown RBP10.36□□□□□ -0.75
DDB1-223ENST00000543658 SLC6A9P48067 706 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 ZNF83P51522 516 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 TPTEP56180 551 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 GALK2Q01415 458 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 TP53I3Q53FA7 332 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 CCDC92Q53HC0 331 aaPredicted RBP10.36□□□□□ -0.75
DDB1-223ENST00000543658 ZNF773Q6PK81 442 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 DEGS2Q6QHC5 323 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 ARL9Q6T311 187 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 RHOUQ7L0Q8 258 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 SSX6Q7RTT6 188 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 KCTD20Q7Z5Y7 419 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 ZNF679Q8IYX0 411 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 RFLNBQ8N5W9 214 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 SLC30A7Q8NEW0 376 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 HAVCR2Q8TDQ0 301 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 C4orf36Q96KX1 117 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 ZNF696Q9H7X3 374 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 SP140LQ9H930 580 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 SLC24A3Q9HC58 644 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 B3GNT2Q9NY97 397 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 GTF2A1LQ9UNN4 478 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 KLHDC2Q9Y2U9 406 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 LRP12Q9Y561 859 aa10.36□□□□□ -0.75
DDB1-223ENST00000543658 SMG1Q96Q15 3661 aaKnown RBP10.36□□□□□ -0.75
DDB1-223ENST00000543658 TMEM129A0AVI4 362 aa10.35□□□□□ -0.75
DDB1-223ENST00000543658 C5orf49A4QMS7 147 aa10.35□□□□□ -0.75
DDB1-223ENST00000543658 ZNF503-AS2A6NEH8 195 aa10.35□□□□□ -0.75
DDB1-223ENST00000543658 PRSS44E7EML9 344 aa10.35□□□□□ -0.75
DDB1-223ENST00000543658 F5H5K5 113 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms