RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 MC2RQ01718 297 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 GLO1Q04760 184 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 SNTB1Q13884 538 aaKnown RBP12.32□□□□□ -0.44
VPS33A-208ENST00000543633 KCNAB1Q14722 419 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 PCK2Q16822 640 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 PABPC1L2AQ5JQF8 200 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-208ENST00000543633 DNM1P34Q6PK57 102 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF761Q86XN6 746 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-208ENST00000543633 OR13C3Q8NGS6 347 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF524Q96C55 264 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 LRRC46Q96FV0 321 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 PHB2Q99623 299 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 CDC6Q99741 560 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 CMKLR1Q99788 373 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 SLC6A7Q99884 636 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 PDCD10Q9BUL8 212 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 NKX6-2Q9C056 277 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-208ENST00000543633 GAREM1Q9H706 876 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 LANCL2Q9NS86 450 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 FBLN5Q9UBX5 448 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 GTF2A1LQ9UNN4 478 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 PRELID3BQ9Y3B1 194 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 RHBDD3Q9Y3P4 386 aa12.32□□□□□ -0.44
VPS33A-208ENST00000543633 MRPS18BQ9Y676 258 aaKnown RBP12.32□□□□□ -0.44
VPS33A-208ENST00000543633 LOC107986453A0A1B0GWG9 222 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 LILRA5A6NI73 299 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 NPIPB13A6NJU9 1138 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 A8MVM7 634 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 NPIPB4C9JG80 1138 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 C11orf98E9PRG8 122 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 HCRTR2O43614 444 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 H2AFB1P0C5Y9 115 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 IL12BP29460 328 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 FNTBP49356 437 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 TAS2R31P59538 309 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF260Q3ZCT1 412 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 PRAMEF17Q5VTA0 474 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 OR2W3Q7Z3T1 314 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 SFTPA2Q8IWL1 248 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 FAM160A2Q8N612 972 aaPredicted RBP12.31□□□□□ -0.44
VPS33A-208ENST00000543633 DTWD2Q8NBA8 298 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 PURGQ9UJV8 347 aaKnown RBP12.31□□□□□ -0.44
VPS33A-208ENST00000543633 VSIG4Q9Y279 399 aa12.31□□□□□ -0.44
VPS33A-208ENST00000543633 KLF2Q9Y5W3 355 aaPredicted RBP12.31□□□□□ -0.44
VPS33A-208ENST00000543633 IGKV3D-11A0A0A0MRZ8 115 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 SULT2B1O00204 365 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 TSPAN2O60636 221 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 CTLA4P16410 223 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 HSD11B1P28845 292 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 CD1CP29017 333 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 CASRP41180 1078 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 FASLGP48023 281 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 NAAAQ02083 359 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 FZD2Q14332 565 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 PNLIPRP3Q17RR3 467 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 PDSS1Q5T2R2 415 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 ATRAIDQ6UW56 229 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 TMEM151BQ8IW70 566 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 THAP6Q8TBB0 222 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 FAM174AQ8TBP5 190 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 PPP1R1CQ8WVI7 109 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 MARC2Q969Z3 335 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 FAM46BQ96A09 425 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 ADOQ96SZ5 270 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF471Q9BX82 626 aaPredicted RBP12.3□□□□□ -0.44
VPS33A-208ENST00000543633 WDR13Q9H1Z4 485 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 G6PC2Q9NQR9 355 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 GDF2Q9UK05 429 aaPredicted RBP12.3□□□□□ -0.44
VPS33A-208ENST00000543633 TMED7-TICAM2A0A0A6YYA0 188 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 H3BSH0 61 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 PLPP3O14495 311 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 FGF16O43320 207 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 OR2T1O43869 369 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 BPNT1O95861 308 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 IGHV4-34P06331 123 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 PRKXP51817 358 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 SLC26A5P58743 744 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 ELAVL1Q15717 326 aaKnown RBP12.3□□□□□ -0.44
VPS33A-208ENST00000543633 C1orf140Q5VVS0 124 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 ARMC10Q8N2F6 343 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 BPIFCQ8NFQ6 507 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 NPAS1Q99742 590 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 MAP3K3Q99759 626 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 UQCC2Q9BRT2 126 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 FAM117AQ9C073 453 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 CGGBP1Q9UFW8 167 aaPredicted RBP12.3□□□□□ -0.44
VPS33A-208ENST00000543633 NDRG3Q9UGV2 375 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF230Q9UIE0 474 aaPredicted RBP12.3□□□□□ -0.44
VPS33A-208ENST00000543633 OR52A1Q9UKL2 312 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
VPS33A-208ENST00000543633 TMED7Q9Y3B3 224 aa12.3□□□□□ -0.44
VPS33A-208ENST00000543633 TRBV6-7A0A0A0MS04 114 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 C9orf170A2RU37 121 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 TMEM235A6NFC5 223 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 F8VVB4 439 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 F8VWA3 439 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 AHSA1O95433 338 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 DDAH2O95865 285 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 IGLV3-19P01714 112 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms