RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 GFOD1Q9NXC2 390 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 OR5V1Q9UGF6 321 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 GPR31O00270 319 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 MSTNO14793 375 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 F10P00742 488 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 SERPINA7P05543 415 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 RRASP10301 218 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 EDN3P14138 238 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 OTX2P32243 289 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 ZNF77Q15935 545 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 TMEM52BQ4KMG9 183 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 SHEQ5VZ18 495 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 MOB3CQ70IA8 216 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 WFDC6Q9BQY6 131 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 UTRNP46939 3433 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 PPP1R2P9O14990 202 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 HIST2H3AQ71DI3 136 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 ARIH2OSQ8N7S6 290 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 STACQ99469 402 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 NAA11Q9BSU3 229 aaPredicted RBP12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 KIF25Q9UIL4 384 aa12.57□□□□□ -0.4
RPS6KC1-206ENST00000543354 A0A0A6YYD5 115 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 NDUFB6O95139 128 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 TK1P04183 234 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 DPTQ07507 201 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 MFAP5Q13361 173 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 PLCXD3Q63HM9 321 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 HPSE2Q8WWQ2 592 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 RBMXL1Q96E39 390 aaKnown RBP12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 SLC25A32Q9H2D1 315 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 ABI3Q9P2A4 366 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 SUSD2Q9UGT4 822 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 RIF1Q5UIP0 2472 aaKnown RBP12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 TMEM200CA6NKL6 621 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 NQO2P16083 231 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 TSFMP43897 325 aaKnown RBP12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 RAB5CP51148 216 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 RPL27P61353 136 aaKnown RBP12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 BPIFCQ8NFQ6 507 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 THAP10Q9P2Z0 257 aaPredicted RBP12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 EP400Q96L91 3159 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 IGHV3-64DA0A0J9YX35 117 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 CD53P19397 219 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 FCGR2CP31995 323 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 EFNA3P52797 238 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 DOC2BQ14184 412 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 AGBL4Q5VU57 503 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 TMEM91Q6ZNR0 172 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 TMPPEQ6ZT21 453 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 ZNF100Q8IYN0 542 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 BCORP1Q8N888 145 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 PTP4A1Q93096 173 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 TSLPQ969D9 159 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 NIPSNAP3BQ9BS92 247 aa12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 EXOSC3Q9NQT5 275 aaKnown RBP12.56□□□□□ -0.4
RPS6KC1-206ENST00000543354 POLR2AP24928 1970 aaKnown RBP12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 TRAV1-2A0A0B4J238 106 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 A8MVM7 634 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 XRCC3O43542 346 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 GUSBP08236 651 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 ZNF728P0DKX0 622 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 POLR2HP52434 150 aaKnown RBP12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 ATP1B3P54709 279 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 SRSF5Q13243 272 aaKnown RBP12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 TAF9Q16594 264 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 TCTN1Q2MV58 587 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 TMEM182Q6ZP80 229 aaPredicted RBP12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 PGAP1Q75T13 922 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 MRPL21Q7Z2W9 205 aaKnown RBP12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 TMEM123Q8N131 208 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 OR1S2Q8NGQ3 325 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 SPPL3Q8TCT6 385 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 AKR1E2Q96JD6 320 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 ARL5BQ96KC2 179 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 HDAC8Q9BY41 377 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 PPP1R3EQ9H7J1 279 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 SIRT4Q9Y6E7 314 aaPredicted RBP12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 A0A1W2PNR3 127 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 UMAD1C9J7I0 102 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 DDAH2O95865 285 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 IGF2P01344 180 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 IGHV3-9P01782 118 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 CASRP41180 1078 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 CSNK1EP49674 416 aaKnown RBP12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 PCBP4P57723 403 aaKnown RBP12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 SNRPEP62304 92 aaKnown RBP12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 RAB11AP62491 216 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 OR2W3Q7Z3T1 314 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 CBLN2Q8IUK8 224 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 GALNT16Q8N428 558 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 OR1M1Q8NGA1 313 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 MALSU1Q96EH3 234 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 JAM3Q9BX67 310 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 ADGRL4Q9HBW9 690 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 ENY2Q9NPA8 101 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 WASF3Q9UPY6 502 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 GCM2O75603 506 aaPredicted RBP12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 PPP2CBP62714 309 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 PPP2CAP67775 309 aa12.55□□□□□ -0.4
RPS6KC1-206ENST00000543354 DHRS2Q13268 280 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms