RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 NPTNQ9Y639 398 aa10.03□□□□□ -0.8
PTPN6-219ENST00000542848 MEGF8Q7Z7M0 2845 aa10.02□□□□□ -0.8
PTPN6-219ENST00000542848 A6NIZ1 184 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 ACOT8O14734 319 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 IGHV2-70P01814 119 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 COX5BP10606 129 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 IFI30P13284 250 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 MSR1P21757 451 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 ZFP36P26651 326 aaKnown RBP10.02□□□□□ -0.81
PTPN6-219ENST00000542848 IFNA8P32881 189 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 CTXN1P60606 82 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 RAP1BP61224 184 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 RAP1AP62834 184 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 UBA52P62987 128 aaKnown RBP10.02□□□□□ -0.81
PTPN6-219ENST00000542848 PSG7Q13046 419 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 TOP3AQ13472 1001 aaPredicted RBP10.02□□□□□ -0.81
PTPN6-219ENST00000542848 SNCBQ16143 134 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 TUSC1Q2TAM9 212 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 CYBRD1Q53TN4 286 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 AWAT1Q58HT5 328 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 ZNF774Q6NX45 483 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 LRRC75AQ8NAA5 344 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 GEMIN6Q8WXD5 167 aaKnown RBP10.02□□□□□ -0.81
PTPN6-219ENST00000542848 RSRC1Q96IZ7 334 aaKnown RBP10.02□□□□□ -0.81
PTPN6-219ENST00000542848 SAMD8Q96LT4 415 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 RNPEPL1Q9HAU8 725 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 MSL2Q9HCI7 577 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 DDX28Q9NUL7 540 aaKnown RBP10.02□□□□□ -0.81
PTPN6-219ENST00000542848 TBCCD1Q9NVR7 557 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 UBAP1Q9NZ09 502 aa10.02□□□□□ -0.81
PTPN6-219ENST00000542848 NDRG4Q9ULP0 352 aaKnown RBP10.02□□□□□ -0.81
PTPN6-219ENST00000542848 ELOVL7A1L3X0 281 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 C12orf71A8MTZ7 269 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 ARPC2O15144 300 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 GSTA4O15217 222 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 WIPF1O43516 503 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 TIMM8AO60220 97 aaPredicted RBP10.01□□□□□ -0.81
PTPN6-219ENST00000542848 PIP5K1CO60331 668 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 SBK2P0C263 348 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 HKR1P10072 659 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 TNFRSF1AP19438 455 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 GSTM3P21266 225 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 TNFSF4P23510 183 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 KDELR2P33947 212 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 SELENOWP63302 87 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 TNFAIP6P98066 277 aaPredicted RBP10.01□□□□□ -0.81
PTPN6-219ENST00000542848 PRKCDQ05655 676 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 FOXL1Q12952 345 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 ENDOGQ14249 297 aaKnown RBP10.01□□□□□ -0.81
PTPN6-219ENST00000542848 TMEM155Q4W5P6 130 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 SPRNQ5BIV9 151 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 RBMS3Q6XE24 437 aaKnown RBP10.01□□□□□ -0.81
PTPN6-219ENST00000542848 LRRC28Q86X40 367 aaPredicted RBP10.01□□□□□ -0.81
PTPN6-219ENST00000542848 MICU2Q8IYU8 434 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 KLHL36Q8N4N3 616 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 SPICQ8N5J4 248 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 RNF148Q8N7C7 305 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 ZNF283Q8N7M2 679 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 CLDN22Q8N7P3 220 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 NPEPL1Q8NDH3 523 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 PRRC1Q96M27 445 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 GPA33Q99795 319 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 ZNF747Q9BV97 191 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 PATZ1Q9HBE1 687 aaKnown RBP10.01□□□□□ -0.81
PTPN6-219ENST00000542848 POLE4Q9NR33 117 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 MAN2C1Q9NTJ4 1040 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 TMEM106BQ9NUM4 274 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 EGFL7Q9UHF1 273 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 A4GNTQ9UNA3 340 aa10.01□□□□□ -0.81
PTPN6-219ENST00000542848 A0A1W2PPL8 197 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 AHCYL1O43865 530 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 ABHD16AO95870 558 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 KITLGP21583 273 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 SLC6A9P48067 706 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 SLC9A3P48764 834 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 FHL1Q13642 323 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 DOK3Q7L591 496 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 OAFQ86UD1 273 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 IGFN1Q86VF2 1251 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 SPATA24Q86W54 205 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 RNF113BQ8IZP6 322 aaKnown RBP10□□□□□ -0.81
PTPN6-219ENST00000542848 DEFB108BQ8NET1 73 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 OR51A7Q8NH64 312 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 C22orf15Q8WYQ4 148 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 LZICQ8WZA0 190 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 DUS3LQ96G46 650 aaKnown RBP10□□□□□ -0.81
PTPN6-219ENST00000542848 TPD52L3Q96J77 140 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 NSMCE2Q96MF7 247 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 COG8Q96MW5 612 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 DCLRE1CQ96SD1 692 aaKnown RBP10□□□□□ -0.81
PTPN6-219ENST00000542848 GORASP2Q9H8Y8 452 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 ZMAT3Q9HA38 289 aaKnown RBP10□□□□□ -0.81
PTPN6-219ENST00000542848 MMP26Q9NRE1 261 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 PLEK2Q9NYT0 353 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 PURGQ9UJV8 347 aaKnown RBP10□□□□□ -0.81
PTPN6-219ENST00000542848 NUP50Q9UKX7 468 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 PPIAL4AQ9Y536 164 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 AUP1Q9Y679 476 aa10□□□□□ -0.81
PTPN6-219ENST00000542848 TRAV27A0A087WT01 109 aa9.99□□□□□ -0.81
PTPN6-219ENST00000542848 TCRBV3S1A0A5B6 114 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms