RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CRHBPP24387 322 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 ST3GAL4Q11206 333 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 RAB39AQ14964 217 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 CCDC92Q53HC0 331 aaPredicted RBP20.11■□□□□ 0.81
HOMER3-205ENST00000542541 ZNF774Q6NX45 483 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 AHSA2Q719I0 299 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 VASH1Q7L8A9 365 aaPredicted RBP20.11■□□□□ 0.81
HOMER3-205ENST00000542541 STX19Q8N4C7 294 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 SLAMF6Q96DU3 332 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 MRPL48Q96GC5 212 aaKnown RBP20.11■□□□□ 0.81
HOMER3-205ENST00000542541 ZNF75AQ96N20 296 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 TBX5Q99593 518 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 COPS4Q9BT78 406 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 ATPIF1Q9UII2 106 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 MYRFQ9Y2G1 1151 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 A0A1W2PQL4 384 aaPredicted RBP20.1■□□□□ 0.81
HOMER3-205ENST00000542541 ZNF83P51522 516 aa20.1■□□□□ 0.81
HOMER3-205ENST00000542541 IDH3GP51553 393 aaPredicted RBP20.1■□□□□ 0.81
HOMER3-205ENST00000542541 IL17RDQ8NFM7 739 aa20.1■□□□□ 0.81
HOMER3-205ENST00000542541 OR1F12Q8NHA8 337 aa20.1■□□□□ 0.81
HOMER3-205ENST00000542541 RNF133Q8WVZ7 376 aa20.1■□□□□ 0.81
HOMER3-205ENST00000542541 ATF6BQ99941 703 aa20.1■□□□□ 0.81
HOMER3-205ENST00000542541 CENPMQ9NSP4 180 aa20.1■□□□□ 0.81
HOMER3-205ENST00000542541 FKBP14Q9NWM8 211 aa20.1■□□□□ 0.81
HOMER3-205ENST00000542541 CHCHD3Q9NX63 227 aaKnown RBP20.1■□□□□ 0.81
HOMER3-205ENST00000542541 DIMT1Q9UNQ2 313 aaKnown RBP20.1■□□□□ 0.81
HOMER3-205ENST00000542541 COL12A1Q99715 3063 aa20.1■□□□□ 0.81
HOMER3-205ENST00000542541 ZNF878C9JN71 531 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 IGLV1-44P01699 117 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 IGHA1P01876 353 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 EPXP11678 715 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 ZNF14P17017 642 aaPredicted RBP20.09■□□□□ 0.81
HOMER3-205ENST00000542541 APLNRP35414 380 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 TAF13Q15543 124 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 ZNF322Q6U7Q0 402 aaPredicted RBP20.09■□□□□ 0.81
HOMER3-205ENST00000542541 TMEM108Q6UXF1 575 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.09■□□□□ 0.81
HOMER3-205ENST00000542541 CPEB3Q8NE35 698 aaKnown RBP20.09■□□□□ 0.81
HOMER3-205ENST00000542541 OR1J2Q8NGS2 313 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 FAM222BQ8WU58 562 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 JAM3Q9BX67 310 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 DUSP21Q9H596 190 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 COPS3Q9UNS2 423 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 KLHDC2Q9Y2U9 406 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 HCFC1P51610 2035 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 M0R1B8 84 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 SYNGR3O43761 229 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 MYL12AP19105 171 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 STOMP27105 288 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 HTR5AP47898 357 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 SLC35A2P78381 396 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 EGR3Q06889 387 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 DEGS2Q6QHC5 323 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 KRT77Q7Z794 578 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 COQ7Q99807 217 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 SPOCK3Q9BQ16 436 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 RHNO1Q9BSD3 238 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 MROQ9BYG7 248 aa20.09■□□□□ 0.81
HOMER3-205ENST00000542541 PNRC2Q9NPJ4 139 aaKnown RBP20.09■□□□□ 0.81
HOMER3-205ENST00000542541 DDX28Q9NUL7 540 aaKnown RBP20.09■□□□□ 0.81
HOMER3-205ENST00000542541 OR6C6A6NF89 314 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 CRYGSP22914 178 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 PTAFRP25105 342 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 APEX1P27695 318 aaKnown RBP20.08■□□□□ 0.8
HOMER3-205ENST00000542541 GDI2P50395 445 aaKnown RBP20.08■□□□□ 0.8
HOMER3-205ENST00000542541 ROM1Q03395 351 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 SEZ6L2Q6UXD5 910 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 MEX3BQ6ZN04 569 aaKnown RBP20.08■□□□□ 0.8
HOMER3-205ENST00000542541 ZNF584Q8IVC4 421 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 ACBD4Q8NC06 268 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 SLC30A7Q8NEW0 376 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 OR10S1Q8NGN2 331 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 SNX33Q8WV41 574 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 AMELYQ99218 206 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 ESRP2Q9H6T0 727 aaKnown RBP20.08■□□□□ 0.8
HOMER3-205ENST00000542541 NPAP1Q9NZP6 1156 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 CRIM1Q9NZV1 1036 aa20.08■□□□□ 0.8
HOMER3-205ENST00000542541 EXOSC1Q9Y3B2 195 aaKnown RBP20.08■□□□□ 0.8
HOMER3-205ENST00000542541 ZNF254O75437 659 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 CLDN1O95832 211 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 H2BFMP0C1H6 154 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 EEF1B2P24534 225 aaKnown RBP20.07■□□□□ 0.8
HOMER3-205ENST00000542541 GRB2P62993 217 aaKnown RBP20.07■□□□□ 0.8
HOMER3-205ENST00000542541 TBC1D28Q2M2D7 210 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 PLEKHG7Q6ZR37 379 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 SPATC1Q76KD6 591 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 EGFL6Q8IUX8 553 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 ZNF679Q8IYX0 411 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 SPTSSAQ969W0 71 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 MS4A3Q96HJ5 214 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 NIPAL2Q9H841 368 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 ERVK13-1Q9NX77 482 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 IKZF2Q9UKS7 526 aa20.07■□□□□ 0.8
HOMER3-205ENST00000542541 IGHV1-18A0A0C4DH31 117 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 A1L4Q6 167 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 KRT8P05787 483 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 CDK1P06493 297 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 CECR9P0C854 216 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 OPRL1P41146 370 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 ACTA2P62736 377 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms