RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 RASGEF1BQ0VAM2 473 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 GLT8D1Q68CQ7 371 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 ARMC10Q8N2F6 343 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 TCTN2Q96GX1 697 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 MRI1Q9BV20 369 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 PCNX3Q9H6A9 2034 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 A0A0B4J2A0 478 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 NPIPB9F8W1W9 429 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 SLC17A2O00624 439 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 CAPZBP47756 277 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 ACTBP60709 375 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 ACTG1P63261 375 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 DMWDQ09019 674 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 PMPCAQ10713 525 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 PPP1R1AQ13522 171 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 SLC17A1Q14916 467 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 ACKR1Q16570 336 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 UTP23Q9BRU9 249 aaKnown RBP13.77□□□□□ -0.21
CNOT9-208ENST00000542068 CST11Q9H112 138 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 ZNF576Q9H609 170 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 MBD2Q9UBB5 411 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 SHPKQ9UHJ6 478 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 GPN3Q9UHW5 284 aaPredicted RBP13.77□□□□□ -0.21
CNOT9-208ENST00000542068 GLS2Q9UI32 602 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 KLK13Q9UKR3 277 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 CPED1A4D0V7 1026 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 OR14I1A6ND48 311 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 PMS2P2O95744 297 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 CD2P06729 351 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 CTLA4P16410 223 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 MGMTP16455 207 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 CNR1P21554 472 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 PRKXP51817 358 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 IL13RA1P78552 427 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 HAGHLQ6PII5 290 aaPredicted RBP13.76□□□□□ -0.21
CNOT9-208ENST00000542068 GKN2Q86XP6 184 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 EXD3Q8N9H8 876 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 OTOSQ8NHW6 89 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 GPX8Q8TED1 209 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 MCHR2Q969V1 340 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 RASL12Q9NYN1 266 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 VSIG4Q9Y279 399 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 A0A1B0GW55 424 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 H3BML4 177 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 P2RY10O00398 339 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 HOXC4P09017 264 aaPredicted RBP13.76□□□□□ -0.21
CNOT9-208ENST00000542068 UBBP0CG47 229 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 UBCP0CG48 685 aaKnown RBP13.76□□□□□ -0.21
CNOT9-208ENST00000542068 DUX4L2P0CJ85 424 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 DUX4L3P0CJ86 424 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 DUX4L4P0CJ87 422 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 DUX4L5P0CJ88 424 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 DUX4L6P0CJ89 424 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 DUX4L7P0CJ90 424 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 SLC25A1P53007 311 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 RPS27AP62979 156 aaKnown RBP13.76□□□□□ -0.21
CNOT9-208ENST00000542068 UBA52P62987 128 aaKnown RBP13.76□□□□□ -0.21
CNOT9-208ENST00000542068 CCINQ13939 588 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 LANCL3Q6ZV70 420 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 TMEM17Q86X19 198 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 ROBO4Q8WZ75 1007 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 LRFN5Q96NI6 719 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 TREM1Q9NP99 234 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 DUX4Q9UBX2 424 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 COL6A3P12111 3177 aa13.76□□□□□ -0.21
CNOT9-208ENST00000542068 AGPAT2O15120 278 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 AQP8O94778 261 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 NSA2O95478 260 aaKnown RBP13.75□□□□□ -0.21
CNOT9-208ENST00000542068 RORAP35398 523 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 SRSF3P84103 164 aaKnown RBP13.75□□□□□ -0.21
CNOT9-208ENST00000542068 FMODQ06828 376 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 RNASE10Q5GAN6 216 aaKnown RBP13.75□□□□□ -0.21
CNOT9-208ENST00000542068 JMJD6Q6NYC1 403 aaPredicted RBP13.75□□□□□ -0.21
CNOT9-208ENST00000542068 TMPPEQ6ZT21 453 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 TRAPPC6BQ86SZ2 158 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 LRRC75AQ8NAA5 344 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 INO80EQ8NBZ0 244 aaPredicted RBP13.75□□□□□ -0.21
CNOT9-208ENST00000542068 COA3Q9Y2R0 106 aaPredicted RBP13.75□□□□□ -0.21
CNOT9-208ENST00000542068 H7C2Y5 167 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 ITGB2P05107 769 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 PNMTP11086 282 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 MANEAQ5SRI9 462 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 EEF1A1P5Q5VTE0 462 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 C11orf87Q6NUJ2 197 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 TMEM71Q6P5X7 295 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 TMEM200AQ86VY9 491 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 ADAD2Q8NCV1 583 aaKnown RBP13.75□□□□□ -0.21
CNOT9-208ENST00000542068 THAP6Q8TBB0 222 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 OR8B4Q96RC9 309 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 PELOQ9BRX2 385 aaKnown RBP13.75□□□□□ -0.21
CNOT9-208ENST00000542068 SLC25A32Q9H2D1 315 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 COPS7AQ9UBW8 275 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 TMEM14AQ9Y6G1 99 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 MUC22E2RYF6 1773 aaPredicted RBP13.75□□□□□ -0.21
CNOT9-208ENST00000542068 SHISA8B8ZZ34 492 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 ATG12O94817 140 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 PMP2P02689 132 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 ASAH2BP0C7U1 165 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 ARRB1P49407 418 aaPredicted RBP13.75□□□□□ -0.21
CNOT9-208ENST00000542068 SNTB1Q13884 538 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms