RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ACHEP22303 614 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 GDF1P27539 372 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 SELENOPP49908 381 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 SFRP5Q5T4F7 317 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 DND1Q8IYX4 353 aaKnown RBP14.54□□□□□ -0.08
VARS2-212ENST00000542001 GABRG1Q8N1C3 465 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 NPEPL1Q8NDH3 523 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 OR51A2Q8NGJ7 313 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 MAP6Q96JE9 813 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 CHRDQ9H2X0 955 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 MRM2Q9UI43 246 aaKnown RBP14.54□□□□□ -0.08
VARS2-212ENST00000542001 MMACHCQ9Y4U1 282 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 PTPRDP23468 1912 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 GABREP78334 506 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 GABRG3Q99928 467 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 PRRT1Q99946 306 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 PPP1R3EQ9H7J1 279 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 GPR84Q9NQS5 396 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 PILRAQ9UKJ1 303 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 GGT3PA6NGU5 568 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 FOXS1O43638 330 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 TRAPPC2P0DI81 140 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 TRAPPC2BP0DI82 140 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 CASRP41180 1078 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 IFITM2Q01629 132 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 BDH1Q02338 343 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 SMUG1Q53HV7 270 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 DMKNQ6E0U4 476 aaPredicted RBP14.53□□□□□ -0.08
VARS2-212ENST00000542001 FOXRED1Q96CU9 486 aaPredicted RBP14.53□□□□□ -0.08
VARS2-212ENST00000542001 GNRHR2Q96P88 292 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 UBE2J1Q9Y385 318 aaPredicted RBP14.53□□□□□ -0.08
VARS2-212ENST00000542001 LAMA3Q16787 3333 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 A6NLC8 198 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 H7C417 338 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 NR2C1P13056 603 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 ACAA2P42765 397 aaKnown RBP14.53□□□□□ -0.08
VARS2-212ENST00000542001 CAPZA1P52907 286 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 FJX1Q86VR8 437 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 OR10R2Q8NGX6 335 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 JAM3Q9BX67 310 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 SMOC1Q9H4F8 434 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 KLHDC2Q9Y2U9 406 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 LRP12Q9Y561 859 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 PCDHGA5Q9Y5G8 931 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 LMO7DNF2Z398 122 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 ZNHIT1O43257 154 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 HLA-DOBP13765 273 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 RNF4P78317 190 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 GAB4Q2WGN9 574 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 EXOSC6Q5RKV6 272 aaKnown RBP14.53□□□□□ -0.08
VARS2-212ENST00000542001 OR6M1Q8NGM8 313 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 TMEM231Q9H6L2 316 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 KCNS2Q9ULS6 477 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 HRH3Q9Y5N1 445 aa14.53□□□□□ -0.08
VARS2-212ENST00000542001 IGHA1P01876 353 aa14.52□□□□□ -0.08
VARS2-212ENST00000542001 HTR5AP47898 357 aa14.52□□□□□ -0.08
VARS2-212ENST00000542001 ZNF100Q8IYN0 542 aa14.52□□□□□ -0.08
VARS2-212ENST00000542001 SUMF1Q8NBK3 374 aa14.52□□□□□ -0.08
VARS2-212ENST00000542001 NAA11Q9BSU3 229 aaPredicted RBP14.52□□□□□ -0.08
VARS2-212ENST00000542001 ALOX5APP20292 161 aa14.52□□□□□ -0.08
VARS2-212ENST00000542001 SLC6A1P30531 599 aa14.52□□□□□ -0.08
VARS2-212ENST00000542001 EIF5AL1Q6IS14 154 aaKnown RBP14.52□□□□□ -0.08
VARS2-212ENST00000542001 ADGRE4PQ86SQ3 457 aa14.52□□□□□ -0.08
VARS2-212ENST00000542001 GVQW1Q8N7I0 195 aa14.52□□□□□ -0.08
VARS2-212ENST00000542001 NECAB3Q96P71 396 aaPredicted RBP14.52□□□□□ -0.08
VARS2-212ENST00000542001 FRRS1LQ9P0K9 344 aa14.52□□□□□ -0.08
VARS2-212ENST00000542001 BET1O15155 118 aa14.52□□□□□ -0.09
VARS2-212ENST00000542001 ZNF205O95201 554 aa14.52□□□□□ -0.09
VARS2-212ENST00000542001 IL32P24001 234 aa14.52□□□□□ -0.09
VARS2-212ENST00000542001 RGS19P49795 217 aa14.52□□□□□ -0.09
VARS2-212ENST00000542001 EBPQ15125 230 aaKnown RBP14.52□□□□□ -0.09
VARS2-212ENST00000542001 PHLDA2Q53GA4 152 aa14.52□□□□□ -0.09
VARS2-212ENST00000542001 TRIM61Q5EBN2 209 aa14.52□□□□□ -0.09
VARS2-212ENST00000542001 TMUB2Q71RG4 321 aa14.52□□□□□ -0.09
VARS2-212ENST00000542001 OR10G3Q8NGC4 313 aa14.52□□□□□ -0.09
VARS2-212ENST00000542001 OR11H7Q8NGC8 314 aa14.52□□□□□ -0.09
VARS2-212ENST00000542001 ABI3Q9P2A4 366 aa14.52□□□□□ -0.09
VARS2-212ENST00000542001 BLACEA4D250 179 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 ANKRD34CP0C6C1 535 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 ERGP11308 486 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 NME2P22392 152 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 MC2RQ01718 297 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 FGL1Q08830 312 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 GUSBP11Q6P575 273 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 LAT2Q9GZY6 243 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 PRR13Q9NZ81 148 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 PCNX1Q96RV3 2341 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 A0A087WV48 116 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 FREM3P0C091 2139 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 LAP3P28838 519 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 EFNB2P52799 333 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 PLP2Q04941 152 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 MARCH1Q8TCQ1 289 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 HLA-CQ95604 372 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 MRI1Q9BV20 369 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 UBE2ZQ9H832 354 aaPredicted RBP14.51□□□□□ -0.09
VARS2-212ENST00000542001 RER1O15258 196 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 ANGPTL7O43827 346 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 ZNF250P15622 560 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 HRH1P35367 487 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms