RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 HAVCR2Q8TDQ0 301 aa24.43■■□□□ 1.5
CCM2-218ENST00000541586 CCDC120Q96HB5 630 aa24.43■■□□□ 1.5
CCM2-218ENST00000541586 COQ7Q99807 217 aa24.43■■□□□ 1.5
CCM2-218ENST00000541586 CRLF2Q9HC73 371 aa24.43■■□□□ 1.5
CCM2-218ENST00000541586 POLR1DQ9Y2S0 133 aa24.43■■□□□ 1.5
CCM2-218ENST00000541586 PHF3Q92576 2039 aaKnown RBP24.43■■□□□ 1.5
CCM2-218ENST00000541586 DOCK7Q96N67 2140 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 A0A0G2JNJ9 132 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 HSPB2A8KAH6 182 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 GABRPO00591 440 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 YES1P07947 543 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 CEACAM8P31997 349 aaPredicted RBP24.42■■□□□ 1.5
CCM2-218ENST00000541586 GUCA1AP43080 201 aaPredicted RBP24.42■■□□□ 1.5
CCM2-218ENST00000541586 ZNF84P51523 738 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 HSPB2Q16082 182 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 TMEM91Q6ZNR0 172 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 NABP1Q96AH0 204 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 GMPPAQ96IJ6 420 aaPredicted RBP24.42■■□□□ 1.5
CCM2-218ENST00000541586 ALKBH3Q96Q83 286 aaPredicted RBP24.42■■□□□ 1.5
CCM2-218ENST00000541586 NELFAQ9H3P2 528 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 B3GAT2Q9NPZ5 323 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 PARPBPQ9NWS1 579 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 Q9UFV3 132 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 SLC5A6Q9Y289 635 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 PCNX1Q96RV3 2341 aa24.42■■□□□ 1.5
CCM2-218ENST00000541586 J3QKU1 62 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 RGS9O75916 674 aaPredicted RBP24.41■■□□□ 1.5
CCM2-218ENST00000541586 CD1AP06126 327 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 CD8BP10966 210 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 MSR1P21757 451 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 GALP22466 123 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 TRAM1Q15629 374 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 RIPPLY2Q5TAB7 128 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 LINGO2Q7L985 606 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 MAP6Q96JE9 813 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 CXorf56Q9H5V9 222 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 LRP12Q9Y561 859 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 CACNA1CQ13936 2221 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 RNF133Q8WVZ7 376 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 PDCD1LG2Q9BQ51 273 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 C1orf198Q9H425 327 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 GLRX2Q9NS18 164 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 ASH2LQ9UBL3 628 aa24.41■■□□□ 1.5
CCM2-218ENST00000541586 ERRFI1Q9UJM3 462 aaPredicted RBP24.41■■□□□ 1.5
CCM2-218ENST00000541586 GDF2Q9UK05 429 aaPredicted RBP24.41■■□□□ 1.5
CCM2-218ENST00000541586 RIDAP52758 137 aaKnown RBP24.4■■□□□ 1.5
CCM2-218ENST00000541586 LSM6P62312 80 aaKnown RBP24.4■■□□□ 1.5
CCM2-218ENST00000541586 ADORA2A-AS1P86434 159 aa24.4■■□□□ 1.5
CCM2-218ENST00000541586 TSPO2Q5TGU0 170 aa24.4■■□□□ 1.5
CCM2-218ENST00000541586 OR7E24Q6IFN5 339 aa24.4■■□□□ 1.5
CCM2-218ENST00000541586 MS4A15Q8N5U1 240 aa24.4■■□□□ 1.5
CCM2-218ENST00000541586 OR2AJ1Q8NGZ0 328 aa24.4■■□□□ 1.5
CCM2-218ENST00000541586 KCTD7Q96MP8 289 aa24.4■■□□□ 1.5
CCM2-218ENST00000541586 ZNF416Q9BWM5 594 aa24.4■■□□□ 1.5
CCM2-218ENST00000541586 SLCO5A1Q9H2Y9 848 aa24.4■■□□□ 1.5
CCM2-218ENST00000541586 C12orf49Q9H741 205 aa24.4■■□□□ 1.5
CCM2-218ENST00000541586 FRRS1LQ9P0K9 344 aa24.4■■□□□ 1.5
CCM2-218ENST00000541586 GSTK1Q9Y2Q3 226 aa24.4■■□□□ 1.5
CCM2-218ENST00000541586 DIDO1Q9BTC0 2240 aaKnown RBP24.4■■□□□ 1.5
CCM2-218ENST00000541586 HIVEP3Q5T1R4 2406 aa24.39■■□□□ 1.5
CCM2-218ENST00000541586 BMP5P22003 454 aa24.39■■□□□ 1.5
CCM2-218ENST00000541586 ALKBH1Q13686 389 aaKnown RBP24.39■■□□□ 1.5
CCM2-218ENST00000541586 CFAP77Q6ZQR2 320 aa24.39■■□□□ 1.5
CCM2-218ENST00000541586 FAM214BQ7L5A3 538 aa24.39■■□□□ 1.5
CCM2-218ENST00000541586 ABHD4Q8TB40 342 aa24.39■■□□□ 1.5
CCM2-218ENST00000541586 SLAMF6Q96DU3 332 aa24.39■■□□□ 1.5
CCM2-218ENST00000541586 GPR35Q9HC97 309 aa24.39■■□□□ 1.5
CCM2-218ENST00000541586 GALNT8Q9NY28 637 aa24.39■■□□□ 1.5
CCM2-218ENST00000541586 DVL2O14641 736 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 CTSSP25774 331 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 AGTR1P30556 359 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 OPRL1P41146 370 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 KIR2DL2P43627 348 aaPredicted RBP24.38■■□□□ 1.49
CCM2-218ENST00000541586 SH3BGRP55822 239 aaPredicted RBP24.38■■□□□ 1.49
CCM2-218ENST00000541586 MRPS34P82930 218 aaKnown RBP24.38■■□□□ 1.49
CCM2-218ENST00000541586 DGUOKQ16854 277 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 VWA1Q6PCB0 445 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 OR10S1Q8NGN2 331 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 OR13C5Q8NGS8 318 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 OR2G2Q8NGZ5 317 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 ZFP3Q96NJ6 502 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 LINC00470Q9BZP3 86 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 CENPMQ9NSP4 180 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 COQ3Q9NZJ6 369 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 EMC9Q9Y3B6 208 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 SS18L1O75177 396 aaPredicted RBP24.38■■□□□ 1.49
CCM2-218ENST00000541586 ZFPL1O95159 310 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 IGHV3-9P01782 118 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 ENDOGQ14249 297 aaKnown RBP24.38■■□□□ 1.49
CCM2-218ENST00000541586 DEGS2Q6QHC5 323 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 NUFIP2Q7Z417 695 aaKnown RBP24.38■■□□□ 1.49
CCM2-218ENST00000541586 SLC7A10Q9NS82 523 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 PMF1-BGLAPU3KQ54 211 aa24.38■■□□□ 1.49
CCM2-218ENST00000541586 GPRIN2O60269 458 aa24.37■■□□□ 1.49
CCM2-218ENST00000541586 ZG16O60844 167 aa24.37■■□□□ 1.49
CCM2-218ENST00000541586 ZNF254O75437 659 aa24.37■■□□□ 1.49
CCM2-218ENST00000541586 SC5DO75845 299 aa24.37■■□□□ 1.49
CCM2-218ENST00000541586 RPS19P39019 145 aaKnown RBP24.37■■□□□ 1.49
CCM2-218ENST00000541586 ROR2Q01974 943 aaKnown RBP24.37■■□□□ 1.49
CCM2-218ENST00000541586 CEACAM16Q2WEN9 425 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms