RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 POU4F2Q12837 409 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 SNTB2Q13425 540 aaKnown RBP16.23■□□□□ 0.19
VPS33A-205ENST00000541169 RIPK1Q13546 671 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 MEP1BQ16820 701 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 OGFRL1Q5TC84 451 aaPredicted RBP16.23■□□□□ 0.19
VPS33A-205ENST00000541169 MEPCEQ7L2J0 689 aaKnown RBP16.23■□□□□ 0.19
VPS33A-205ENST00000541169 MUC15Q8N387 334 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 OR51L1Q8NGJ5 315 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 MNTQ99583 582 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 PITX2Q99697 317 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 ATF6BQ99941 703 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 APOL4Q9BPW4 351 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 VCX3BQ9H321 246 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 CBLN4Q9NTU7 201 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 TBCCD1Q9NVR7 557 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 WARS2Q9UGM6 360 aaKnown RBP16.23■□□□□ 0.19
VPS33A-205ENST00000541169 CMAHPQ9Y471 501 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 GMPPBQ9Y5P6 360 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 TMEM14AQ9Y6G1 99 aa16.23■□□□□ 0.19
VPS33A-205ENST00000541169 ABCA12Q86UK0 2595 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 E9PQ18 207 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 SLC16A6O15403 523 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 ATE1O95260 518 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 APOC1P02654 83 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 SPARCP09486 303 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 POLR2IP36954 125 aaKnown RBP16.22■□□□□ 0.19
VPS33A-205ENST00000541169 SNRPGP62308 76 aaKnown RBP16.22■□□□□ 0.19
VPS33A-205ENST00000541169 APOFQ13790 326 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 GGTLC2Q14390 218 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 EFNB3Q15768 340 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 MOGQ16653 247 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 CCDC92Q53HC0 331 aaPredicted RBP16.22■□□□□ 0.19
VPS33A-205ENST00000541169 AADACL4Q5VUY2 407 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 TTC23Q5W5X9 447 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.22■□□□□ 0.19
VPS33A-205ENST00000541169 ERI1Q8IV48 349 aaKnown RBP16.22■□□□□ 0.19
VPS33A-205ENST00000541169 ZNF511Q8NB15 262 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 FAM81AQ8TBF8 368 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 SPTSSAQ969W0 71 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 C4orf45Q96LM5 186 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 Q96MT0 163 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 YIPF3Q9GZM5 350 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 MED20Q9H944 212 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 DDX28Q9NUL7 540 aaKnown RBP16.22■□□□□ 0.19
VPS33A-205ENST00000541169 GPR160Q9UJ42 338 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 ITPR2Q14571 2701 aa16.22■□□□□ 0.19
VPS33A-205ENST00000541169 LOC100509620A0A075B734 347 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 LOC100130705A0A1B0GUX0 176 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 TVP23AA6NH52 213 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 B9A039 149 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 RRP9O43818 475 aaKnown RBP16.21■□□□□ 0.19
VPS33A-205ENST00000541169 GPANK1O95872 356 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 PAX1P15863 534 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 CD53P19397 219 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 CCNOP22674 350 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 GRB2P62993 217 aaKnown RBP16.21■□□□□ 0.19
VPS33A-205ENST00000541169 ZIK1Q3SY52 487 aaPredicted RBP16.21■□□□□ 0.19
VPS33A-205ENST00000541169 KRT80Q6KB66 452 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 SLC16A9Q7RTY1 509 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 TIGD4Q8IY51 512 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 OR5L1Q8NGL2 311 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 ZNRF4Q8WWF5 429 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 IL4I1Q96RQ9 567 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 MBOAT4Q96T53 435 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 SP140LQ9H930 580 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 WDR76Q9H967 626 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 FAM118AQ9NWS6 357 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.21■□□□□ 0.19
VPS33A-205ENST00000541169 PMF1-BGLAPU3KQ54 211 aa16.21■□□□□ 0.19
VPS33A-205ENST00000541169 ZNF878C9JN71 531 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 H0YJX3 145 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 PHYHO14832 338 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 ABHD16AO95870 558 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 PEX2P28328 305 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 SNRPD2P62316 118 aaKnown RBP16.2■□□□□ 0.18
VPS33A-205ENST00000541169 IL18R1Q13478 541 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 ADIPOQQ15848 244 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 OCLNQ16625 522 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 LRRC36Q1X8D7 754 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 LPCAT4Q643R3 524 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 RGS7BPQ6MZT1 257 aaPredicted RBP16.2■□□□□ 0.18
VPS33A-205ENST00000541169 CORO6Q6QEF8 472 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 B3GLCTQ6Y288 498 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 DCXRQ7Z4W1 244 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 LINC00346Q8IVM7 164 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 LRRC75A-AS1Q8N1F1 130 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 OR6N2Q8NGY6 317 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 OTOSQ8NHW6 89 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 IGFBPL1Q8WX77 278 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 NEUROG1Q92886 237 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 ZMYND19Q96E35 227 aaPredicted RBP16.2■□□□□ 0.18
VPS33A-205ENST00000541169 TRMT61AQ96FX7 289 aaKnown RBP16.2■□□□□ 0.18
VPS33A-205ENST00000541169 TRAF4Q9BUZ4 470 aaPredicted RBP16.2■□□□□ 0.18
VPS33A-205ENST00000541169 LAMP3Q9UQV4 416 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 FBN2P35556 2912 aa16.2■□□□□ 0.18
VPS33A-205ENST00000541169 DSCAMO60469 2012 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 HRNRQ86YZ3 2850 aaPredicted RBP16.19■□□□□ 0.18
VPS33A-205ENST00000541169 OR4A8P0C604 315 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 HTR1FP30939 366 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 THBS4P35443 961 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms