RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 LRRC18Q8N456 261 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 TMEM178AQ8NBL3 297 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 AP3S1Q92572 193 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 SOSTQ9BQB4 213 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 SOX7Q9BT81 388 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 SRRQ9GZT4 340 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 C1orf198Q9H425 327 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 ZCCHC4Q9H5U6 513 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 ZDHHC11Q9H8X9 412 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 ACKR4Q9NPB9 350 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 DDX28Q9NUL7 540 aaKnown RBP10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 OR52A1Q9UKL2 312 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 FREM1Q5H8C1 2179 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 NCOR2Q9Y618 2525 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 TMEM269A0A1B0GVZ9 245 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 LOC110117498-PIK3R3F6TDL0 507 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 LINC01387J3KSC0 135 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 P2RY10O00398 339 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 ARL6IP5O75915 188 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 SLC2A1P11166 492 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 EPXP11678 715 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 ELK1P19419 428 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 P2RY14Q15391 338 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 BAK1Q16611 211 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 HES5Q5TA89 166 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 STAC2Q6ZMT1 411 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 Q6ZNX1 250 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 TUSC5Q8IXB3 177 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 WDYHV1Q96HA8 205 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 DIRAS2Q96HU8 199 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 COMMD4Q9H0A8 199 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 CRLF2Q9HC73 371 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 ZNF319Q9P2F9 582 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 WASF3Q9UPY6 502 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 RCE1Q9Y256 329 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 NOTOA8MTQ0 251 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 SLC43A1O75387 559 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 TTRP02766 147 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 PATE4P0C8F1 98 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 MSR1P21757 451 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 APEX1P27695 318 aaKnown RBP10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 PRKXP51817 358 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 FOXG1P55316 489 aaPredicted RBP10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 CLDN12P56749 244 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 RSPO1Q2MKA7 263 aaPredicted RBP10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 CCDC92Q53HC0 331 aaPredicted RBP10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 DEGS2Q6QHC5 323 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 DCDC5Q6ZRR9 648 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 NAA40Q86UY6 237 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 MEIOBQ8N635 442 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 OR2AJ1Q8NGZ0 328 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 FGFBP3Q8TAT2 258 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 GPR148Q8TDV2 347 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 SLC7A6Q92536 515 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 TMEM106AQ96A25 262 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 FBXO17Q96EF6 278 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 SH3GL3Q99963 347 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 NELFAQ9H3P2 528 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 TIGARQ9NQ88 270 aa10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 URB1O60287 2271 aaKnown RBP10.8□□□□□ -0.68
AP003559.1-201ENST00000540906 IGKV3D-15A0A087WSY6 115 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 TRGV5A0A0B4J1U4 118 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 LOC107986453A0A1B0GWG9 222 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 CDK2AP1O14519 115 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 SSX4O60224 188 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 TMCC2O75069 709 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 TGM6O95932 706 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 ADRB1P08588 477 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 ACSM4P0C7M7 580 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 PSMD7P51665 324 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 PPP3R1P63098 170 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 PLA2G7Q13093 441 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 PDSS1Q5T2R2 415 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 TSPO2Q5TGU0 170 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 FAM131AQ6UXB0 335 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 ZNF433Q8N7K0 673 aaPredicted RBP10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 TRMT10AQ8TBZ6 339 aaKnown RBP10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 HAVCR2Q8TDQ0 301 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 CHPT1Q8WUD6 406 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 TSEN15Q8WW01 171 aaKnown RBP10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 ASB5Q8WWX0 329 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 LDAHQ9H6V9 325 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 CALHM2Q9HA72 323 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 N6AMT1Q9Y5N5 214 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 RTTNQ86VV8 2226 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 CEP295Q9C0D2 2601 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 FABP12A6NFH5 140 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 ZNF878C9JN71 531 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 ACOT7O00154 380 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 MAS1P04201 325 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 B4GALT1P15291 398 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 SPNP16150 400 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 EVX1P49640 407 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 MMP16P51512 607 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 LSM6P62312 80 aaKnown RBP10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 HIST1H3AP68431 136 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 BCL2A1Q16548 175 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 CEACAM16Q2WEN9 425 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 HIST2H3PS2Q5TEC6 136 aa10.79□□□□□ -0.68
AP003559.1-201ENST00000540906 HIST2H3AQ71DI3 136 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms