RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 NCF2P19878 526 aaPredicted RBP1.53□□□□□ -2.16
MDM2-227ENST00000540709 ME2P23368 584 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 CHMLP26374 656 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 TNNT2P45379 298 aaPredicted RBP1.53□□□□□ -2.16
MDM2-227ENST00000540709 CSNK1EP49674 416 aaKnown RBP1.53□□□□□ -2.16
MDM2-227ENST00000540709 CDKN2DP55273 166 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 UBE2HP62256 183 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 CCNA1P78396 465 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 SLC25A11Q02978 314 aaKnown RBP1.53□□□□□ -2.16
MDM2-227ENST00000540709 PRKCDQ05655 676 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 CHIT1Q13231 466 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 SRSF5Q13243 272 aaKnown RBP1.53□□□□□ -2.16
MDM2-227ENST00000540709 ZMYND11Q15326 602 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 PPP1R7Q15435 360 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 OR7A5Q15622 319 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 SSX2Q16385 188 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 ANKDD1AQ495B1 522 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 CASP12Q6UXS9 341 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 TMEM150AQ86TG1 271 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 TMEM105Q8N8V8 129 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 NECAB1Q8N987 351 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 OR2L3Q8NG85 312 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 OR1P1Q8NH06 330 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 DCPSQ96C86 337 aaKnown RBP1.53□□□□□ -2.16
MDM2-227ENST00000540709 USP47Q96K76 1375 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 ATP5SQ99766 215 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 MICU1Q9BPX6 476 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 SLC2A8Q9NY64 477 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 PSMC3IPQ9P2W1 217 aaPredicted RBP1.53□□□□□ -2.16
MDM2-227ENST00000540709 UXTQ9UBK9 157 aaPredicted RBP1.53□□□□□ -2.16
MDM2-227ENST00000540709 CRCT1Q9UGL9 99 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 LSM7Q9UK45 103 aaKnown RBP1.53□□□□□ -2.16
MDM2-227ENST00000540709 LRRIQ3A6PVS8 624 aaPredicted RBP1.52□□□□□ -2.17
MDM2-227ENST00000540709 LYRM9A8MSI8 78 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 DNASE2O00115 360 aaPredicted RBP1.52□□□□□ -2.17
MDM2-227ENST00000540709 FOXE1O00358 373 aaPredicted RBP1.52□□□□□ -2.17
MDM2-227ENST00000540709 AIM2O14862 343 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 NUPL2O15504 423 aaKnown RBP1.52□□□□□ -2.17
MDM2-227ENST00000540709 EIF4E2O60573 245 aaKnown RBP1.52□□□□□ -2.17
MDM2-227ENST00000540709 KLHL41O60662 606 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 EIF1BO60739 113 aaKnown RBP1.52□□□□□ -2.17
MDM2-227ENST00000540709 CLPXO76031 633 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 NDUFB10O96000 172 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 ERGP11308 486 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 COL8A2P25067 703 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 PSMB5P28074 263 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 GPX4P36969 197 aaPredicted RBP1.52□□□□□ -2.17
MDM2-227ENST00000540709 EIF1P41567 113 aaKnown RBP1.52□□□□□ -2.17
MDM2-227ENST00000540709 CDH6P55285 790 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 SYNJ2BPP57105 145 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 TAS2R31P59538 309 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 FUT5Q11128 374 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 ADNP2Q6IQ32 1131 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 H3F3CQ6NXT2 135 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 KDELC1Q6UW63 502 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 CDR2LQ86X02 465 aaPredicted RBP1.52□□□□□ -2.17
MDM2-227ENST00000540709 COX18Q8N8Q8 333 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 TTLQ8NG68 377 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 OR6N1Q8NGY5 312 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 CIRBP-AS1Q8TBR5 109 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 OR5B12Q96R08 314 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 CRACR2AQ9BSW2 395 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 GON7Q9BXV9 100 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 SLC38A10Q9HBR0 1119 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 HYPKQ9NX55 129 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 STARD10Q9Y365 291 aa1.52□□□□□ -2.17
MDM2-227ENST00000540709 IGHV3OR16-8A0A075B7F1 116 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 IGHV7-4-1A0A0J9YVY3 117 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 ARHGEF35A5YM69 484 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 CYB5R3P00387 301 aaPredicted RBP1.51□□□□□ -2.17
MDM2-227ENST00000540709 PAHP00439 452 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 CTSLP07711 333 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 SLC2A3P11169 496 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 ZNF24P17028 368 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 NAA10P41227 235 aaPredicted RBP1.51□□□□□ -2.17
MDM2-227ENST00000540709 ACTR1AP61163 376 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 STXBP1P61764 594 aaKnown RBP1.51□□□□□ -2.17
MDM2-227ENST00000540709 PPP1CBP62140 327 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 CDK5Q00535 292 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 IL15RAQ13261 267 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 YIF1BQ5BJH7 314 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 PRAMEF5Q5TYX0 476 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 FAM222AQ5U5X8 452 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 UBE2UQ5VVX9 321 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 PRAMEF6Q5VXH4 476 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 CENPPQ6IPU0 288 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 CASC1Q6TDU7 716 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 CERS6Q6ZMG9 384 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 RGS9BPQ6ZS82 235 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 CHST4Q8NCG5 386 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 ZNF680Q8NEM1 530 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 LRRC29Q8WV35 223 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 TMEM230Q96A57 120 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 TUBGCP3Q96CW5 907 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 TVP23CQ96ET8 276 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 C1orf50Q9BV19 199 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 GCOM2Q9BZD3 368 aaPredicted RBP1.51□□□□□ -2.17
MDM2-227ENST00000540709 FGF23Q9GZV9 251 aaPredicted RBP1.51□□□□□ -2.17
MDM2-227ENST00000540709 NT5C3AQ9H0P0 336 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 EDA2RQ9HAV5 297 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms