RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PHYHIPLQ96FC7 376 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 GAL3ST4Q96RP7 486 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 PDCD10Q9BUL8 212 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 LRRC61Q9BV99 259 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 NUDT9Q9BW91 350 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 GPR27Q9NS67 375 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 TAS2R3Q9NYW6 316 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 MYEF2Q9P2K5 600 aaKnown RBP11.02□□□□□ -0.64
NPC1-202ENST00000540608 NOP16Q9Y3C1 178 aaKnown RBP11.02□□□□□ -0.64
NPC1-202ENST00000540608 MMACHCQ9Y4U1 282 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 FITM1A5D6W6 292 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 CCDC85CA6NKD9 419 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 TMEM150CB9EJG8 249 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 ALG1L2C9J202 215 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 PLPP3O14495 311 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 DDAH2O95865 285 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 HLA-AP01891 365 aaKnown RBP11.02□□□□□ -0.65
NPC1-202ENST00000540608 RAB6AP20340 208 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 MPZP25189 248 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 CRABP1P29762 137 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 ARRB1P49407 418 aaPredicted RBP11.02□□□□□ -0.65
NPC1-202ENST00000540608 BLKP51451 505 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 CCR5P51681 352 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 LUMP51884 338 aaPredicted RBP11.02□□□□□ -0.65
NPC1-202ENST00000540608 POLR2HP52434 150 aaKnown RBP11.02□□□□□ -0.65
NPC1-202ENST00000540608 DCAF7P61962 342 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 GLO1Q04760 184 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 SPOCK1Q08629 439 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 ELOCQ15369 112 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 VWA2Q5GFL6 755 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 PHF19Q5T6S3 580 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 OR10K2Q6IF99 312 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 C17orf107Q6ZR85 190 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 Q6ZS52 159 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 LYPD6Q86Y78 171 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 PRRT1Q99946 306 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 VSIG4Q9Y279 399 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 EMC9Q9Y3B6 208 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 ALPK2Q86TB3 2170 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 CACNA1CQ13936 2221 aa11.02□□□□□ -0.65
NPC1-202ENST00000540608 TMED7-TICAM2A0A0A6YYA0 188 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 TMEM235A6NFC5 223 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 MPTX1A8MV57 137 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 A8MVM7 634 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 TSPAN2O60636 221 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 MPZL1O95297 269 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 ICAM2P13598 275 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 ZBTB25P24278 435 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 MAOBP27338 520 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 C1orf140Q5VVS0 124 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 CORO6Q6QEF8 472 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 LYG2Q86SG7 212 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 OR4S1Q8NGB4 309 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 FOXRED1Q96CU9 486 aaPredicted RBP11.01□□□□□ -0.65
NPC1-202ENST00000540608 LRRC46Q96FV0 321 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 SEC22AQ96IW7 307 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 G6PC2Q9NQR9 355 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 OR52A1Q9UKL2 312 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 COA3Q9Y2R0 106 aaPredicted RBP11.01□□□□□ -0.65
NPC1-202ENST00000540608 TMED7Q9Y3B3 224 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 BRWD1Q9NSI6 2320 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 CDC14CA4D256 554 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 NAT1P18440 290 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 LTBRP36941 435 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 CAPZA1P52907 286 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 CXADRP78310 365 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 ZNF169Q14929 603 aaPredicted RBP11.01□□□□□ -0.65
NPC1-202ENST00000540608 RAB12Q6IQ22 244 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 ZNF704Q6ZNC4 412 aaPredicted RBP11.01□□□□□ -0.65
NPC1-202ENST00000540608 NKAIN3Q8N8D7 197 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 BPIFCQ8NFQ6 507 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 PPP1R1CQ8WVI7 109 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 TSLPQ969D9 159 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 PMEPA1Q969W9 287 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 TBL1XR1Q9BZK7 514 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 NRSN2Q9GZP1 204 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 SLC6A15Q9H2J7 730 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 C8orf33Q9H7E9 229 aaPredicted RBP11.01□□□□□ -0.65
NPC1-202ENST00000540608 GDF2Q9UK05 429 aaPredicted RBP11.01□□□□□ -0.65
NPC1-202ENST00000540608 RAB22AQ9UL26 194 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 RHBDD3Q9Y3P4 386 aa11.01□□□□□ -0.65
NPC1-202ENST00000540608 IGKV3D-11A0A0A0MRZ8 115 aa11□□□□□ -0.65
NPC1-202ENST00000540608 LOC107986453A0A1B0GWG9 222 aa11□□□□□ -0.65
NPC1-202ENST00000540608 RNF222A6NCQ9 220 aa11□□□□□ -0.65
NPC1-202ENST00000540608 METTL21EPA6NDL7 271 aa11□□□□□ -0.65
NPC1-202ENST00000540608 IL2RAP01589 272 aa11□□□□□ -0.65
NPC1-202ENST00000540608 GP1BAP07359 652 aa11□□□□□ -0.65
NPC1-202ENST00000540608 NKPD1Q17RQ9 610 aa11□□□□□ -0.65
NPC1-202ENST00000540608 ZNF260Q3ZCT1 412 aa11□□□□□ -0.65
NPC1-202ENST00000540608 CDNFQ49AH0 187 aa11□□□□□ -0.65
NPC1-202ENST00000540608 PAN3Q58A45 887 aaKnown RBP11□□□□□ -0.65
NPC1-202ENST00000540608 C3orf33Q6P1S2 294 aa11□□□□□ -0.65
NPC1-202ENST00000540608 OR2W3Q7Z3T1 314 aa11□□□□□ -0.65
NPC1-202ENST00000540608 CD163Q86VB7 1156 aa11□□□□□ -0.65
NPC1-202ENST00000540608 ZDHHC22Q8N966 263 aa11□□□□□ -0.65
NPC1-202ENST00000540608 OR4D6Q8NGJ1 314 aa11□□□□□ -0.65
NPC1-202ENST00000540608 MITD1Q8WV92 249 aa11□□□□□ -0.65
NPC1-202ENST00000540608 ZNF75AQ96N20 296 aa11□□□□□ -0.65
NPC1-202ENST00000540608 PDE7BQ9NP56 450 aa11□□□□□ -0.65
NPC1-202ENST00000540608 SOHLH2Q9NX45 425 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms