RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SSX2Q16385 188 aa11.8□□□□□ -0.52
DNMT1-203ENST00000540357 C1orf140Q5VVS0 124 aa11.8□□□□□ -0.52
DNMT1-203ENST00000540357 MISPQ8IVT2 679 aa11.8□□□□□ -0.52
DNMT1-203ENST00000540357 BAHD1Q8TBE0 780 aaPredicted RBP11.8□□□□□ -0.52
DNMT1-203ENST00000540357 MARCH1Q8TCQ1 289 aa11.8□□□□□ -0.52
DNMT1-203ENST00000540357 NUDCD2Q8WVJ2 157 aa11.8□□□□□ -0.52
DNMT1-203ENST00000540357 MFRPQ9BY79 579 aa11.8□□□□□ -0.52
DNMT1-203ENST00000540357 LAT2Q9GZY6 243 aa11.8□□□□□ -0.52
DNMT1-203ENST00000540357 SPACA1Q9HBV2 294 aa11.8□□□□□ -0.52
DNMT1-203ENST00000540357 TDRD15B5MCY1 1934 aaKnown RBP11.8□□□□□ -0.52
DNMT1-203ENST00000540357 UMAD1C9J7I0 102 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 ZGLP1P0C6A0 271 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 RPL12P30050 165 aaKnown RBP11.79□□□□□ -0.52
DNMT1-203ENST00000540357 METAP1P53582 386 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 HSD17B7P56937 341 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 ZNF266Q14584 549 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 ISXQ2M1V0 245 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 FBXW12Q6X9E4 464 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 FGF13Q92913 245 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 PLEKHA2Q9HB19 425 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 NPDC1Q9NQX5 325 aaPredicted RBP11.79□□□□□ -0.52
DNMT1-203ENST00000540357 TRIP12Q14669 1992 aaPredicted RBP11.79□□□□□ -0.52
DNMT1-203ENST00000540357 TTLL8A6PVC2 850 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 ADAM10O14672 748 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 DOK2O60496 412 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 CEACAM5P06731 702 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 BLVRBP30043 206 aaPredicted RBP11.79□□□□□ -0.52
DNMT1-203ENST00000540357 FUT5Q11128 374 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 ACKR1Q16570 336 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 WDR38Q5JTN6 314 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 ZNF660Q6AZW8 331 aaPredicted RBP11.79□□□□□ -0.52
DNMT1-203ENST00000540357 SEZ6L2Q6UXD5 910 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 OR52N5Q8NH56 324 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 RSC1A1Q92681 617 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 ZNF75AQ96N20 296 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 ZNF426Q9BUY5 554 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 CHRNA9Q9UGM1 479 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 SLC17A4Q9Y2C5 497 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 TMEM229AB2RXF0 380 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 PPP1R2P9O14990 202 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 PTP4A3O75365 173 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 SLC34A2O95436 690 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 NSA2O95478 260 aaKnown RBP11.79□□□□□ -0.52
DNMT1-203ENST00000540357 SMIM6P0DI80 62 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 SNRPEP62304 92 aaKnown RBP11.79□□□□□ -0.52
DNMT1-203ENST00000540357 PPP2CBP62714 309 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 PPP2CAP67775 309 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 PPP1R1AQ13522 171 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 SLC22A25Q6T423 547 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 EMG1Q92979 244 aaKnown RBP11.79□□□□□ -0.52
DNMT1-203ENST00000540357 NMNAT2Q9BZQ4 307 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 FN3KRPQ9HA64 309 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 A0A1W2PPV9 198 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 TP53I11O14683 189 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 GSTP1P09211 210 aaKnown RBP11.79□□□□□ -0.52
DNMT1-203ENST00000540357 RPS27P42677 84 aaKnown RBP11.79□□□□□ -0.52
DNMT1-203ENST00000540357 SLC26A5P58743 744 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 SSX9Q7RTT3 188 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 HAS2Q92819 552 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 NAA11Q9BSU3 229 aaPredicted RBP11.79□□□□□ -0.52
DNMT1-203ENST00000540357 UFSP2Q9NUQ7 469 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 B9D1Q9UPM9 204 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 FLVCR1Q9Y5Y0 555 aa11.79□□□□□ -0.52
DNMT1-203ENST00000540357 MPTX1A8MV57 137 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 PRAMEF26H0Y7S4 382 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 DCTN6O00399 190 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 OR2A4O95047 310 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 OR2C1O95371 312 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 SEMA4FO95754 770 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 HPP00738 406 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 FCGR2CP31995 323 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 SRPXP78539 464 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 ARRDC1Q8N5I2 433 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 SAT2Q96F10 170 aaPredicted RBP11.78□□□□□ -0.52
DNMT1-203ENST00000540357 OR2A7Q96R45 310 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 SHARPINQ9H0F6 387 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 RAB18Q9NP72 206 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 UQCC1Q9NVA1 299 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 MRM2Q9UI43 246 aaKnown RBP11.78□□□□□ -0.52
DNMT1-203ENST00000540357 SLC5A6Q9Y289 635 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 POMT1Q9Y6A1 747 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 SMCO3A2RU48 225 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 H3BML4 177 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 LILRB5O75023 590 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 DUS4LO95620 317 aaKnown RBP11.78□□□□□ -0.52
DNMT1-203ENST00000540357 VSIG10L2P0DP72 767 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 FOSL1P15407 271 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 GNB3P16520 340 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 ZNF136P52737 540 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 CNN3Q15417 329 aaKnown RBP11.78□□□□□ -0.52
DNMT1-203ENST00000540357 LRRTM1Q86UE6 522 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 NPEPL1Q8NDH3 523 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 OR4S1Q8NGB4 309 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 OR1S1Q8NH92 325 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 PRSS27Q9BQR3 290 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 MOB1AQ9H8S9 216 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 CES1P1Q9UKY3 287 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 NPTNQ9Y639 398 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 TRAV20A0A0B4J274 112 aa11.78□□□□□ -0.52
DNMT1-203ENST00000540357 TO15178 435 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms