RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 FAM46BQ96A09 425 aa10.28□□□□□ -0.76
C11orf54-214ENST00000540113 FGGYQ96C11 551 aa10.28□□□□□ -0.76
C11orf54-214ENST00000540113 KCNK17Q96T54 332 aa10.28□□□□□ -0.76
C11orf54-214ENST00000540113 B3GNT4Q9C0J1 378 aa10.28□□□□□ -0.76
C11orf54-214ENST00000540113 TINAGL1Q9GZM7 467 aaPredicted RBP10.28□□□□□ -0.76
C11orf54-214ENST00000540113 CKLFQ9UBR5 152 aa10.28□□□□□ -0.76
C11orf54-214ENST00000540113 R4GMQ9 66 aa10.28□□□□□ -0.76
C11orf54-214ENST00000540113 EML6Q6ZMW3 1958 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 LOC100509620A0A075B734 347 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 OR2J2O76002 312 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 CD2P06729 351 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 CSF1P09603 554 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 H2BFMP0C1H6 154 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 AKAIN1P0CW23 69 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 IGFBP3P17936 291 aaPredicted RBP10.27□□□□□ -0.76
C11orf54-214ENST00000540113 CDAP32320 146 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 ZXDAP98168 799 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 OPCMLQ14982 345 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 GLT8D1Q68CQ7 371 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 PMS2CLQ68D20 193 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 STEAP1BQ6NZ63 245 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 C17orf107Q6ZR85 190 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 GPAT4Q86UL3 456 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 CDH24Q86UP0 819 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.27□□□□□ -0.76
C11orf54-214ENST00000540113 OR4S1Q8NGB4 309 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 SEH1LQ96EE3 360 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 SOX7Q9BT81 388 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 C1QTNF6Q9BXI9 259 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 GPN1Q9HCN4 374 aaPredicted RBP10.27□□□□□ -0.76
C11orf54-214ENST00000540113 TMEM138Q9NPI0 162 aa10.27□□□□□ -0.76
C11orf54-214ENST00000540113 FARSAQ9Y285 508 aaKnown RBP10.27□□□□□ -0.76
C11orf54-214ENST00000540113 CCDC163A0A0D9SF12 145 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 A0A1W2PPL8 197 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 RPS10-NUDT3A0A1W2PQS6 291 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 OR2M5A3KFT3 312 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 TMEM235A6NFC5 223 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 VSTM2BA6NLU5 285 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 ZNF814B7Z6K7 855 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 SLC2A1P11166 492 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 ZNF250P15622 560 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 ZNF28P17035 718 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 PTGS2P35354 604 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 MFAP5Q13361 173 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 HLA-BQ31612 363 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 TMEM164Q5U3C3 297 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 TMED4Q7Z7H5 227 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 GABRG1Q8N1C3 465 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 OR2I1PQ8NGU4 316 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 NUBPLQ8TB37 319 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 RNF138Q8WVD3 245 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 C11orf40Q8WZ69 217 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 SPACA5Q96QH8 159 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 SPSB2Q99619 263 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 DUSP23Q9BVJ7 150 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 EXO5Q9H790 373 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 SEC61A2Q9H9S3 476 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 CHST11Q9NPF2 352 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 PTTG3PQ9NZH4 202 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 PPP4R1LQ9P1A2 415 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 FBXL2Q9UKC9 423 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 PILRBQ9UKJ0 227 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 RARRES3Q9UL19 164 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 HHLA2Q9UM44 414 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 COL6A3P12111 3177 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 FREM2Q5SZK8 3169 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 WDFY4Q6ZS81 3184 aa10.27□□□□□ -0.77
C11orf54-214ENST00000540113 PLSCR5A0PG75 271 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 WIPF3A6NGB9 483 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 HSPB2A8KAH6 182 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 TEX46H3BTG2 121 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 L7N2F9 121 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 ARPC5O15511 151 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 RAMP1O60894 148 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 PDGFBP01127 241 aaPredicted RBP10.26□□□□□ -0.77
C11orf54-214ENST00000540113 FAUP35544 74 aaKnown RBP10.26□□□□□ -0.77
C11orf54-214ENST00000540113 GNALP38405 381 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 EMP2P54851 167 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 DCDP81605 110 aaKnown RBP10.26□□□□□ -0.77
C11orf54-214ENST00000540113 MYBPHQ13203 477 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 HSPB2Q16082 182 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 NKPD1Q17RQ9 610 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 SLC22A6Q4U2R8 563 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 C4orf46Q504U0 113 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 RFPL4BQ6ZWI9 263 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 COMMD7Q86VX2 200 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 MISPQ8IVT2 679 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 SPICQ8N5J4 248 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 CLEC1AQ8NC01 280 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 GPX8Q8TED1 209 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 SFXN2Q96NB2 322 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 UTP23Q9BRU9 249 aaKnown RBP10.26□□□□□ -0.77
C11orf54-214ENST00000540113 POFUT1Q9H488 388 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 PTGES2Q9H7Z7 377 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 COQ3Q9NZJ6 369 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 EMC3Q9P0I2 261 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 UBQLN2Q9UHD9 624 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 FBXO4Q9UKT5 387 aa10.26□□□□□ -0.77
C11orf54-214ENST00000540113 FXYD6-FXYD2A0A087WZ82 144 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms