RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PTP4A1Q93096 173 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 POP5Q969H6 163 aaKnown RBP12.95□□□□□ -0.34
UBE3B-211ENST00000539843 FAM46AQ96IP4 442 aaKnown RBP12.95□□□□□ -0.34
UBE3B-211ENST00000539843 Q96M85 177 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 SLC6A7Q99884 636 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 MRI1Q9BV20 369 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 NMNAT1Q9HAN9 279 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-211ENST00000539843 ASH2LQ9UBL3 628 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 OR5V1Q9UGF6 321 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 IL19Q9UHD0 177 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 ATPIF1Q9UII2 106 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 KLHL21Q9UJP4 597 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 SAMD4AQ9UPU9 718 aaKnown RBP12.95□□□□□ -0.34
UBE3B-211ENST00000539843 PPP1R3CQ9UQK1 317 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 SNX13Q9Y5W8 968 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 ENPP4Q9Y6X5 453 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 OR6C6A6NF89 314 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 FFAR1O14842 300 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 PRSS23O95084 383 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 CRABP1P29762 137 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 COMPP49747 757 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-211ENST00000539843 BTG1P62324 171 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 ESCO2Q56NI9 601 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 MESTQ5EB52 335 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 CGB2Q6NT52 195 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 HACD2Q6Y1H2 254 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 ATG16L2Q8NAA4 619 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 OR1F12Q8NHA8 337 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 RASD2Q96D21 266 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 CMBLQ96DG6 245 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 CMTM5Q96DZ9 223 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 GPA33Q99795 319 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 SYT4Q9H2B2 425 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 CCDC134Q9H6E4 229 aa12.94□□□□□ -0.34
UBE3B-211ENST00000539843 A0A1W2PRQ8 180 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 LRRC30A6NM36 301 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 CDC42EP2O14613 210 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 IGHV2-70P01814 119 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 RAC2P15153 192 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 CTLA4P16410 223 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 RHCEP18577 417 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 CPT2P23786 658 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 MDH2P40926 338 aaKnown RBP12.93□□□□□ -0.34
UBE3B-211ENST00000539843 SRP9P49458 86 aaKnown RBP12.93□□□□□ -0.34
UBE3B-211ENST00000539843 GSK3BP49841 420 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 SMIM11AP58511 58 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 DGCR6Q14129 220 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 TBPL2Q6SJ96 375 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 DPY19L2P2Q6ZN68 376 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 FAM122BQ7Z309 247 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 JAZF1Q86VZ6 243 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 ZNF283Q8N7M2 679 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 GJC3Q8NFK1 279 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 SGMS2Q8NHU3 365 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 SLC7A13Q8TCU3 470 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 APOBEC3DQ96AK3 386 aaPredicted RBP12.93□□□□□ -0.34
UBE3B-211ENST00000539843 RSRC1Q96IZ7 334 aaKnown RBP12.93□□□□□ -0.34
UBE3B-211ENST00000539843 ZNF582Q96NG8 517 aaPredicted RBP12.93□□□□□ -0.34
UBE3B-211ENST00000539843 HDHD2Q9H0R4 259 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 ZMAT3Q9HA38 289 aaKnown RBP12.93□□□□□ -0.34
UBE3B-211ENST00000539843 PATZ1Q9HBE1 687 aaKnown RBP12.93□□□□□ -0.34
UBE3B-211ENST00000539843 AUP1Q9Y679 476 aa12.93□□□□□ -0.34
UBE3B-211ENST00000539843 ANK2Q01484 3957 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 TMEM89A2RUT3 159 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 UNC119BA6NIH7 251 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 NME4O00746 187 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 SOCS2O14508 198 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 RENP00797 406 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 AVPP01185 164 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 SELEP16581 610 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 IFNGR2P38484 337 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 BTNL3Q6UXE8 466 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 C1orf229Q6ZS94 237 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-211ENST00000539843 C1orf87Q8N0U7 546 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 OR13G1Q8NGZ3 307 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 ITLN1Q8WWA0 313 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 MCUR1Q96AQ8 359 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 HAVCR1Q96D42 359 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 OR2V2Q96R30 315 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 GPX7Q96SL4 187 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-211ENST00000539843 SPAG4Q9NPE6 437 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 NRIP3Q9NQ35 241 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 VSX1Q9NZR4 365 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-211ENST00000539843 EGFL7Q9UHF1 273 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 SIGLEC7Q9Y286 467 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 COA3Q9Y2R0 106 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-211ENST00000539843 NBEAL1Q6ZS30 2694 aa12.92□□□□□ -0.34
UBE3B-211ENST00000539843 IRF2P14316 349 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 NOS3P29474 1203 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 FHL1Q13642 323 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 SLC36A3Q495N2 470 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 GLYATQ6IB77 296 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 SMARCD3Q6STE5 483 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 LRRC28Q86X40 367 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-211ENST00000539843 FANK1Q8TC84 345 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 PLEKHA8Q96JA3 519 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 COQ7Q99807 217 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 CDADC1Q9BWV3 514 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 HCAR1Q9BXC0 346 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 MED4Q9NPJ6 270 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms