RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 F5H5P2 479 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 ZNF217O75362 1048 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 SRSF10O75494 262 aaKnown RBP12.56□□□□□ -0.4
UBE3B-210ENST00000539599 LDOC1O95751 146 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-210ENST00000539599 LPLP06858 475 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 GIMD1P0DJR0 217 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 RRASP10301 218 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 ZNF823P16415 610 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 PNLIPRP2P54317 469 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 BIDP55957 195 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 RAB14P61106 215 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 TLE3Q04726 772 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 PMPCAQ10713 525 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 GPAT4Q86UL3 456 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 D2HGDHQ8N465 521 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 OR6N1Q8NGY5 312 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 ADAT3Q96EY9 351 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-210ENST00000539599 SLC6A7Q99884 636 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 CNTD2Q9H8S5 307 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 MASP2O00187 686 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 ZNF432O94892 652 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 ROM1Q03395 351 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 ZMYND11Q15326 602 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 KCTD18Q6PI47 426 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-210ENST00000539599 OGFOD3Q6PK18 319 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 TSSK4Q6SA08 328 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 ZNF574Q6ZN55 896 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-210ENST00000539599 CHST4Q8NCG5 386 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 OR2I1PQ8NGU4 316 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 ASB10Q8WXI3 467 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 CPED1A4D0V7 1026 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 DUX1O43812 170 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 MT-ATP6P00846 226 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 IL5P05113 134 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 PPP3CBP16298 524 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 IGFBP3P17936 291 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-210ENST00000539599 ACHEP22303 614 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 PRKXP51817 358 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 MAP2K6P52564 334 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 RAP2BP61225 183 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 BOLLQ8N9W6 283 aaKnown RBP12.55□□□□□ -0.4
UBE3B-210ENST00000539599 OR13C9Q8NGT0 318 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 PNPLA2Q96AD5 504 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 UTP23Q9BRU9 249 aaKnown RBP12.55□□□□□ -0.4
UBE3B-210ENST00000539599 SEC61A2Q9H9S3 476 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 UCK1Q9HA47 277 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 CKLFQ9UBR5 152 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 SPEF1Q9Y4P9 236 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 R4GMQ9 66 aa12.55□□□□□ -0.4
UBE3B-210ENST00000539599 TRBV11-1A0A0K0K1C0 115 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 A0A1W2PP11 408 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 A0A1W2PQD3 144 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 C5orf63A6NC05 138 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 SNRPGP15A8MWD9 76 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 TO15178 435 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 SHOXO15266 292 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 NUPL2O15504 423 aaKnown RBP12.54□□□□□ -0.4
UBE3B-210ENST00000539599 OR4E1P0C645 316 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 FAUP35544 74 aaKnown RBP12.54□□□□□ -0.4
UBE3B-210ENST00000539599 PI4KAP42356 2102 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 DLX5P56178 289 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 LY6G6FQ5SQ64 297 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 GLT8D1Q68CQ7 371 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 PTCRAQ6ISU1 281 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-210ENST00000539599 OR10S1Q8NGN2 331 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 C11orf40Q8WZ69 217 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 NICN1Q9BSH3 213 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 C12orf10Q9HB07 376 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 KLRF1Q9NZS2 232 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 TMEM200CA6NKL6 621 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 PHYHO14832 338 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 MBTPS2O43462 519 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 CD2P06729 351 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 NMBP08949 121 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 SRFP11831 508 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 GNB3P16520 340 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 S100A11P31949 105 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 HSF1Q00613 529 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 UNC119Q13432 240 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 ATPAF1Q5TC12 328 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-210ENST00000539599 FDX2Q6P4F2 183 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 CFAP77Q6ZQR2 320 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 PLXDC1Q8IUK5 500 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 OR10G3Q8NGC4 313 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 ASB17Q8WXJ9 295 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 RBPMSQ93062 196 aaKnown RBP12.54□□□□□ -0.4
UBE3B-210ENST00000539599 MRI1Q9BV20 369 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 ZNF275Q9NSD4 429 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-210ENST00000539599 PRR13Q9NZ81 148 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 EMC3Q9P0I2 261 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 HHLA2Q9UM44 414 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 CACNA1EQ15878 2313 aa12.54□□□□□ -0.4
UBE3B-210ENST00000539599 CEP192Q8TEP8 1941 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 TRAV14DV4A0A0A6YYC5 116 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 TMEM82A0PJX8 343 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 RLN2P04090 185 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 CELA2AP08217 269 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 H2BFMP0C1H6 154 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 ABOP16442 354 aa12.53□□□□□ -0.4
UBE3B-210ENST00000539599 SFTPDP35247 375 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms