RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TMEM225Q6GV28 225 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 ASPHD2Q6ICH7 369 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 OR5M10Q6IEU7 315 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 BIVMQ86UB2 503 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 ZNF441Q8N8Z8 693 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 CLEC1AQ8NC01 280 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 OR6S1Q8NH40 331 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 GPX8Q8TED1 209 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 ASB5Q8WWX0 329 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 SLC25A28Q96A46 364 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 SEMA4CQ9C0C4 833 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 CDCP1Q9H5V8 836 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 U3KQA8 63 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 CELSR3Q9NYQ7 3312 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 SEC16AO15027 2179 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 CACNA1CQ13936 2221 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 TMEM272A0A1B0GTI8 110 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 MEGF11A6BM72 1044 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 C1QTNF9BB2RNN3 333 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 AHSA1O95433 338 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 WNT11O96014 354 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 C1QTNF9P0C862 333 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 IGFBP3P17936 291 aaPredicted RBP13.03□□□□□ -0.32
CDCA3-207ENST00000538862 EFNA3P52797 238 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 SEC61A1P61619 476 aaKnown RBP13.03□□□□□ -0.32
CDCA3-207ENST00000538862 GUCA2AQ02747 115 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 GLO1Q04760 184 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 EIF2B1Q14232 305 aaKnown RBP13.03□□□□□ -0.32
CDCA3-207ENST00000538862 NDUFAF7Q7L592 441 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 SLC38A6Q8IZM9 456 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 OR52B4Q8NGK2 314 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 OR1J4Q8NGS1 313 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 LRRC20Q8TCA0 184 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 ABHD6Q9BV23 337 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 OPN4Q9UHM6 478 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 PCNX3Q9H6A9 2034 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 C17orf51A8MQB3 221 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 KDM4BO94953 1096 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 RLN1P04808 185 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 HTR2CP28335 458 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 VWA2Q5GFL6 755 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 ARHGAP40Q5TG30 622 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 STEAP1BQ6NZ63 245 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 CDH26Q8IXH8 852 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 D2HGDHQ8N465 521 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 OR2AK2Q8NG84 335 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 OR4D10Q8NGI6 311 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 OR51S1Q8NGJ8 323 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 OR52N5Q8NH56 324 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 OR1L3Q8NH93 324 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 ATG5Q9H1Y0 275 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 SLCO5A1Q9H2Y9 848 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 NARFLQ9H6Q4 476 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 SCPEP1Q9HB40 452 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 APMAPQ9HDC9 416 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 UPB1Q9UBR1 384 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 KCNN3Q9UGI6 736 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 GTF2A1LQ9UNN4 478 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 LRP12Q9Y561 859 aa13.02□□□□□ -0.32
CDCA3-207ENST00000538862 USP24Q9UPU5 2620 aa13.02□□□□□ -0.33
CDCA3-207ENST00000538862 DMXL2Q8TDJ6 3036 aa13.02□□□□□ -0.33
CDCA3-207ENST00000538862 A0A0A6YYH2 397 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 A6NJ64 397 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 SRSF10O75494 262 aaKnown RBP13.01□□□□□ -0.33
CDCA3-207ENST00000538862 WISP1O95388 367 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 FBXO45P0C2W1 286 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 SLC26A5P58743 744 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 TAS2R19P59542 299 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 MFGE8Q08431 387 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-207ENST00000538862 ZP4Q12836 540 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 ETFDHQ16134 617 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 YOD1Q5VVQ6 348 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-207ENST00000538862 B3GNTL1Q67FW5 361 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-207ENST00000538862 OR7E24Q6IFN5 339 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 NHLRC1Q6VVB1 395 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 MISPQ8IVT2 679 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 TMEM229BQ8NBD8 167 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 ZNF248Q8NDW4 579 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 OR6M1Q8NGM8 313 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 PPP1R14AQ96A00 147 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 DNAJA3Q96EY1 480 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 SLC41A2Q96JW4 573 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 FOXN4Q96NZ1 517 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 ZNF587Q96SQ5 575 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-207ENST00000538862 DUSP23Q9BVJ7 150 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 C12orf4Q9NQ89 552 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 DCAF16Q9NXF7 216 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 ZNF107Q9UII5 783 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-207ENST00000538862 R4GMQ9 66 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 CPED1A4D0V7 1026 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 A6NIZ1 184 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 F5H5P2 479 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 CD3DP04234 171 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 ITGB2P05107 769 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 ISG15P05161 165 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 LPLP06858 475 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 GABRA1P14867 456 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 ACP1P24666 158 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 CALCRP30988 508 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 S100A11P31949 105 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms