RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 VASH1Q7L8A9 365 aaPredicted RBP12.73□□□□□ -0.37
RAB40B-202ENST00000538809 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.73□□□□□ -0.37
RAB40B-202ENST00000538809 SPATA3Q8NHX4 192 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 SLC7A6Q92536 515 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 TSSK2Q96PF2 358 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 BTBD10Q9BSF8 475 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 NUAK2Q9H093 628 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 C1orf21Q9H246 121 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 MAGIXQ9H6Y5 334 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 ELOVL3Q9HB03 270 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 PLEK2Q9NYT0 353 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 ASH2LQ9UBL3 628 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 TMEFF2Q9UIK5 374 aaPredicted RBP12.73□□□□□ -0.37
RAB40B-202ENST00000538809 NDRG4Q9ULP0 352 aaKnown RBP12.73□□□□□ -0.37
RAB40B-202ENST00000538809 PRPF19Q9UMS4 504 aaKnown RBP12.73□□□□□ -0.37
RAB40B-202ENST00000538809 IGLV1-36A0A0B4J1U3 117 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 PLSCR5A0PG75 271 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 B4DSR2 109 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 TIMM8AO60220 97 aaPredicted RBP12.72□□□□□ -0.37
RAB40B-202ENST00000538809 KRT36O76013 467 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 TFP02787 698 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 GAAP10253 952 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 SLC6A6P31641 620 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 CRYBB2P43320 205 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 CENPAP49450 140 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 DVL1P1P54792 670 aaPredicted RBP12.72□□□□□ -0.37
RAB40B-202ENST00000538809 LSM6P62312 80 aaKnown RBP12.72□□□□□ -0.37
RAB40B-202ENST00000538809 TEKQ02763 1124 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 SPRNQ5BIV9 151 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 ZNF771Q7L3S4 317 aaPredicted RBP12.72□□□□□ -0.37
RAB40B-202ENST00000538809 GLCCI1Q86VQ1 547 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 DHFR2Q86XF0 187 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 GLB1L2Q8IW92 636 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 OR9Q2Q8NGE9 314 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 GNPDA2Q8TDQ7 276 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 TMEM158Q8WZ71 300 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 SAMD8Q96LT4 415 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 ERMAPQ96PL5 475 aaPredicted RBP12.72□□□□□ -0.37
RAB40B-202ENST00000538809 TRIM15Q9C019 465 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 MSL2Q9HCI7 577 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 VNN3Q9NY84 501 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 TMCC3Q9ULS5 477 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 POLR1DQ9Y2S0 133 aa12.72□□□□□ -0.37
RAB40B-202ENST00000538809 DOCK11Q5JSL3 2073 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 CLDN25C9JDP6 229 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 H3BSA7 217 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 ACOT8O14734 319 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 HIST1H1CP16403 213 aaKnown RBP12.71□□□□□ -0.37
RAB40B-202ENST00000538809 SRP14P37108 136 aaKnown RBP12.71□□□□□ -0.37
RAB40B-202ENST00000538809 RBMXP38159 391 aaKnown RBP12.71□□□□□ -0.37
RAB40B-202ENST00000538809 IFNGR2P38484 337 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 LMO4P61968 165 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 HIST1H3AP68431 136 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 MEP1BQ16820 701 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 KRTAP24-1Q3LI83 254 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 CCDC92Q53HC0 331 aaPredicted RBP12.71□□□□□ -0.37
RAB40B-202ENST00000538809 FAM209AQ5JX71 171 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 HIST2H3PS2Q5TEC6 136 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 LEG1Q6P5S2 330 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 ARL9Q6T311 187 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 HIST2H3AQ71DI3 136 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 C1orf174Q8IYL3 243 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 ASB9Q96DX5 294 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 ELMOD3Q96FG2 381 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 CLPTM1LQ96KA5 538 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 FN3KQ9H479 309 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 GRIP1Q9Y3R0 1128 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 WIPI2Q9Y4P8 454 aa12.71□□□□□ -0.37
RAB40B-202ENST00000538809 STAB1Q9NY15 2570 aa12.71□□□□□ -0.38
RAB40B-202ENST00000538809 OR6C6A6NF89 314 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 TNFRSF11BO00300 401 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 RER1O15258 196 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 MSMBP08118 114 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 DBHP09172 617 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 GSTM3P21266 225 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 CRABP1P29762 137 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 ERFP50548 548 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 PSG7Q13046 419 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 HFEQ30201 348 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 ZBTB46Q86UZ6 589 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 JAZF1Q86VZ6 243 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 OR6V1Q8N148 313 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 LINC00471Q8N535 108 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 NPEPL1Q8NDH3 523 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 OR4K13Q8NH42 304 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 TMEM186Q96B77 213 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 NMNAT3Q96T66 252 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 DDOQ99489 341 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 IFT27Q9BW83 186 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 REPIN1Q9BWE0 567 aaKnown RBP12.7□□□□□ -0.38
RAB40B-202ENST00000538809 EGLN3Q9H6Z9 239 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 ZNF665Q9H7R5 613 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 HIF1ANQ9NWT6 349 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 ATPIF1Q9UII2 106 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 B9D1Q9UPM9 204 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 STARD10Q9Y365 291 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 CDH10Q9Y6N8 788 aa12.7□□□□□ -0.38
RAB40B-202ENST00000538809 OR6C68A6NDL8 312 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 BHLHE40O14503 412 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 IDH3BO43837 385 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms