RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 ZNF878C9JN71 531 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 LINC01387J3KSC0 135 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 EEF1E1O43324 174 aaKnown RBP13.12□□□□□ -0.31
ATL3-203ENST00000538786 LANCL1O43813 399 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 POU3F2P20265 443 aaPredicted RBP13.12□□□□□ -0.31
ATL3-203ENST00000538786 GUCA1AP43080 201 aaPredicted RBP13.12□□□□□ -0.31
ATL3-203ENST00000538786 KIR2DL3P43628 341 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 GFRA1P56159 465 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 OR1C1Q15619 314 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 ZNF57Q68EA5 555 aaPredicted RBP13.12□□□□□ -0.31
ATL3-203ENST00000538786 DTX1Q86Y01 620 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 RAB40AQ8WXH6 277 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 PNPLA2Q96AD5 504 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 NPAP1Q9NZP6 1156 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 ASH2LQ9UBL3 628 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 B4GALT7Q9UBV7 327 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 CTDSPLO15194 276 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 WDPCPO95876 746 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 LSM6P62312 80 aaKnown RBP13.11□□□□□ -0.31
ATL3-203ENST00000538786 PHYHD1Q5SRE7 291 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 ASPHD2Q6ICH7 369 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 FOXL2NBQ6ZUU3 175 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 UBQLNLQ8IYU4 475 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 ELMOD2Q8IZ81 293 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 OR13C3Q8NGS6 347 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 OR2V1Q8NHB1 315 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 ITPKCQ96DU7 683 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 ZFP3Q96NJ6 502 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 MMP28Q9H239 520 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 FOXD3Q9UJU5 478 aaPredicted RBP13.11□□□□□ -0.31
ATL3-203ENST00000538786 MRPS7Q9Y2R9 242 aaKnown RBP13.11□□□□□ -0.31
ATL3-203ENST00000538786 CFAP54Q96N23 3096 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 FREM3P0C091 2139 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 CDRT15L2A8MXV6 281 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 GSTZ1O43708 216 aaPredicted RBP13.11□□□□□ -0.31
ATL3-203ENST00000538786 CXCL13O43927 109 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 ADRB1P08588 477 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 FAM157BP0CG42 384 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 IGFBP3P17936 291 aaPredicted RBP13.11□□□□□ -0.31
ATL3-203ENST00000538786 CSRP1P21291 193 aaKnown RBP13.11□□□□□ -0.31
ATL3-203ENST00000538786 HSD11B1P28845 292 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 STARP49675 285 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 ART1P52961 327 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 PSMA6P60900 246 aaKnown RBP13.11□□□□□ -0.31
ATL3-203ENST00000538786 CD300CQ08708 224 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 AGAP6Q5VW22 663 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 LINC00696Q6ZRV3 163 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 OR10D3Q8NH80 312 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 SYNPRQ8TBG9 265 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 HPS1Q92902 700 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 S100A16Q96FQ6 103 aaKnown RBP13.11□□□□□ -0.31
ATL3-203ENST00000538786 AGAP4Q96P64 663 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 PBOV1Q9GZY1 135 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 NELFAQ9H3P2 528 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 ZNF703Q9H7S9 590 aaPredicted RBP13.11□□□□□ -0.31
ATL3-203ENST00000538786 MOB1AQ9H8S9 216 aa13.11□□□□□ -0.31
ATL3-203ENST00000538786 ZNF716A6NP11 495 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 P2RY10O00398 339 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 CDK2AP1O14519 115 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 TFECO14948 347 aaPredicted RBP13.1□□□□□ -0.31
ATL3-203ENST00000538786 DHHO43323 396 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 TTRP02766 147 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 HPNP05981 417 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 MSR1P21757 451 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 SELENOPP49908 381 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 TCF15Q12870 199 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 TAF13Q15543 124 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 CARTPTQ16568 116 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 SGCAQ16586 387 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 ABLIM2Q6H8Q1 611 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 PLET1Q6UQ28 207 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 SULF2Q8IWU5 870 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 C20orf196Q8IYI0 205 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 YIPF5Q969M3 257 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 HAVCR1Q96D42 359 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 RNF121Q9H920 327 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 PNRC2Q9NPJ4 139 aaKnown RBP13.1□□□□□ -0.31
ATL3-203ENST00000538786 TAS2R4Q9NYW5 299 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 PLA2G3Q9NZ20 509 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 NUFIP1Q9UHK0 495 aaKnown RBP13.1□□□□□ -0.31
ATL3-203ENST00000538786 RCE1Q9Y256 329 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 FLVCR1Q9Y5Y0 555 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 CUL9Q8IWT3 2517 aa13.1□□□□□ -0.31
ATL3-203ENST00000538786 FAM240BA0A1B0GVZ2 78 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 SLC17A2O00624 439 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 RER1O15258 196 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 ACSM4P0C7M7 580 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 CD37P11049 281 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 CLDN15P56746 228 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 DGCR2P98153 550 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 GPR176Q14439 515 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 GLT8D1Q68CQ7 371 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 AKAP14Q86UN6 197 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 SMIM4Q8WVI0 70 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 CPNE4Q96A23 557 aaPredicted RBP13.09□□□□□ -0.31
ATL3-203ENST00000538786 ZNF416Q9BWM5 594 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 COL25A1Q9BXS0 654 aaPredicted RBP13.09□□□□□ -0.31
ATL3-203ENST00000538786 HES7Q9BYE0 225 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 ULBP2Q9BZM5 246 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms