RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 A0A1W2PRV1 198 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 CLDN34H7C241 214 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 ZNF354AO60765 605 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 GLB1P16278 677 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 YPEL5P62699 121 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 HSF1Q00613 529 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 CAMKMTQ7Z624 323 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 PPP1R1CQ8WVI7 109 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 NOL4LQ96MY1 436 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 MARVELD1Q9BSK0 173 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 SEC11CQ9BY50 192 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 RBM38Q9H0Z9 239 aaKnown RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 SLC35B3Q9H1N7 401 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 ASH2LQ9UBL3 628 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 R4GMQ9 66 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 ZNF320A2RRD8 509 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 NKX6-3A6NJ46 265 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 ZNF814B7Z6K7 855 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 FZD9O00144 591 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 CYC1P08574 325 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 EPXP11678 715 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 DRD1P21728 446 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 C12orf73Q69YU5 71 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 MRM1Q6IN84 353 aaKnown RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 OR2W3Q7Z3T1 314 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 LHX4Q969G2 390 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 ZNF845Q96IR2 970 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 CDCA3Q99618 268 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 SPOCK3Q9BQ16 436 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 FAM103A1Q9BTL3 118 aaKnown RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 BARHL1Q9BZE3 327 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 PLSCR3Q9NRY6 295 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 DDX60Q8IY21 1712 aaKnown RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 A0A0A6YYC8 382 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 TRBV11-1A0A0K0K1C0 115 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 LEUTXA8MZ59 168 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 I3L1I5 382 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 DVL1O14640 695 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 MRPL33O75394 65 aaKnown RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 ARNTP27540 789 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 P2RY2P41231 377 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 CLDN17P56750 224 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 FABP9Q0Z7S8 132 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 NR0B2Q15466 257 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 PHLDA2Q53GA4 152 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 STAC2Q6ZMT1 411 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 H1FNTQ75WM6 255 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 DCXRQ7Z4W1 244 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 TMEM99Q8N816 258 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 LHFPL5Q8TAF8 219 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 NECTIN4Q96NY8 510 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 RPH3ALQ9UNE2 315 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 IGLV3-10A0A075B6K4 115 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 MBLAC1A4D2B0 266 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 GSTZ1O43708 216 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 SOX15O60248 233 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 SCO1O75880 301 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 ALOX5APP20292 161 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 ELLP55199 621 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 FAHD2BQ6P2I3 314 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 PARS2Q7L3T8 475 aaKnown RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 KIAA1958Q8N8K9 716 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 HGDQ93099 445 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 SCMH1Q96GD3 660 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 FAHD2AQ96GK7 314 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 AKR1E2Q96JD6 320 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 WDR83Q9BRX9 315 aaKnown RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 RNF167Q9H6Y7 350 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 SIRT7Q9NRC8 400 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 PPT2Q9UMR5 302 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 TMEM218A2RU14 115 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 SERPINE3A8MV23 424 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 SLC2A1P11166 492 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 NID1P14543 1247 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 FABP4P15090 132 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 CTSCP53634 463 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 SNRPNP63162 240 aaKnown RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 THEM4Q5T1C6 240 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 YOD1Q5VVQ6 348 aaPredicted RBP6.33□□□□□ -1.4
SORT1-209ENST00000538502 PRR22Q8IZ63 422 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 OR10D4PQ8NGN7 298 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 ANAPC16Q96DE5 110 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 CTDSP1Q9GZU7 261 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 TMEM231Q9H6L2 316 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 KIR3DX1Q9H7L2 352 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 HS3ST2Q9Y278 367 aa6.33□□□□□ -1.4
SORT1-209ENST00000538502 GPR31O00270 319 aa6.32□□□□□ -1.4
SORT1-209ENST00000538502 HMGN4O00479 90 aa6.32□□□□□ -1.4
SORT1-209ENST00000538502 HCRTR1O43613 425 aa6.32□□□□□ -1.4
SORT1-209ENST00000538502 CIDEAO60543 219 aa6.32□□□□□ -1.4
SORT1-209ENST00000538502 PRAMEF4O60810 478 aa6.32□□□□□ -1.4
SORT1-209ENST00000538502 MBPP02686 304 aaPredicted RBP6.32□□□□□ -1.4
SORT1-209ENST00000538502 RPLP1P05386 114 aaKnown RBP6.32□□□□□ -1.4
SORT1-209ENST00000538502 G0S2P27469 103 aa6.32□□□□□ -1.4
SORT1-209ENST00000538502 BIDP55957 195 aa6.32□□□□□ -1.4
SORT1-209ENST00000538502 ZNF154Q13106 437 aa6.32□□□□□ -1.4
SORT1-209ENST00000538502 TMEM88Q6PEY1 159 aa6.32□□□□□ -1.4
SORT1-209ENST00000538502 ALKAL1Q6UXT8 129 aa6.32□□□□□ -1.4
SORT1-209ENST00000538502 LSRQ86X29 649 aaPredicted RBP6.32□□□□□ -1.4
SORT1-209ENST00000538502 TMEM25Q86YD3 366 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms