RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 OR1J1Q8NGS3 322 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 SYNPRQ8TBG9 265 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 KLF14Q8TD94 323 aaPredicted RBP7.17□□□□□ -1.26
SPARC-208ENST00000538026 IPCEF1Q8WWN9 437 aaPredicted RBP7.17□□□□□ -1.26
SPARC-208ENST00000538026 FAM168AQ92567 244 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 PTP4A1Q93096 173 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 MAP6Q96JE9 813 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 C4orf45Q96LM5 186 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 TSSK6Q9BXA6 273 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 OR2J1Q9GZK6 312 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 RACGAP1Q9H0H5 632 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 C1orf198Q9H425 327 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 REEP1Q9H902 201 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 MED20Q9H944 212 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 CYB5R1Q9UHQ9 305 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 SPEF1Q9Y4P9 236 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 FKBP7Q9Y680 259 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 STAB1Q9NY15 2570 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 DOCK11Q5JSL3 2073 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 ARRDC5A6NEK1 342 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 TVP23AA6NH52 213 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 ZSCAN5BA6NJL1 495 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 SGCEO43556 437 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 DOK2O60496 412 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 ENTPD5O75356 428 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 TIPRLO75663 272 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 PTHP01270 115 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 GYPBP06028 91 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 LCKP06239 509 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 NR2C1P13056 603 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 EPHA2P29317 976 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 CRABP1P29762 137 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 RAD52P43351 418 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 HTR5AP47898 357 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 DAPP51397 102 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 RIPPLY3P57055 190 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 DSCR9P59020 149 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 PCBD1P61457 104 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 CBX1P83916 185 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 TEKQ02763 1124 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 GLO1Q04760 184 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 PSG7Q13046 419 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 AQP6Q13520 282 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 TRIP10Q15642 601 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 PCK2Q16822 640 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 TMEM249Q2WGJ8 235 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 SLC36A3Q495N2 470 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 MBNL2Q5VZF2 373 aaKnown RBP7.16□□□□□ -1.26
SPARC-208ENST00000538026 Q6ZR03 302 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 LINC00346Q8IVM7 164 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 ZNF786Q8N393 782 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 ZNF511Q8NB15 262 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 OR9Q1Q8NGQ5 310 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 OR1F12Q8NHA8 337 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 ABHD4Q8TB40 342 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 UBASH3BQ8TF42 649 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 GIPC3Q8TF64 312 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 LRGUKQ96M69 825 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 RHNO1Q9BSD3 238 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 BCL2L14Q9BZR8 327 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 BPESC1Q9GZL8 116 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 RAB1BQ9H0U4 201 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 LRMDAQ9H2I8 198 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 KCNN2Q9H2S1 579 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 WDR76Q9H967 626 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 KRCC1Q9NPI7 259 aaPredicted RBP7.16□□□□□ -1.26
SPARC-208ENST00000538026 TBCCD1Q9NVR7 557 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 PDP1Q9P0J1 537 aaPredicted RBP7.16□□□□□ -1.26
SPARC-208ENST00000538026 CACNG2Q9Y698 323 aa7.16□□□□□ -1.26
SPARC-208ENST00000538026 TENM1Q9UKZ4 2725 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 TRRAPQ9Y4A5 3859 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 LOC390937A0A1W2PQ73 354 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 LRP5LA4QPB2 252 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 FAM183AA6NL82 134 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 C17orf100A8MU93 164 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 M0R233 179 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 CD5LO43866 347 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 RENP00797 406 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 IGHV1-46P01743 117 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 IGHV4-31P0DP07 118 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 BMP4P12644 408 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 SLC25A16P16260 332 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 SPI1P17947 270 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 PDLIM4P50479 330 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 SLC25A1P53007 311 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 KLF3P57682 345 aaPredicted RBP7.15□□□□□ -1.26
SPARC-208ENST00000538026 PPP1CBP62140 327 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 CDK5Q00535 292 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 SCRN3Q0VDG4 424 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 HLXQ14774 488 aaPredicted RBP7.15□□□□□ -1.26
SPARC-208ENST00000538026 TMEM236Q5W0B7 351 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 FAHD1Q6P587 224 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 COLCA1Q6ZS62 124 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 JAZF1Q86VZ6 243 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 PRIMA1Q86XR5 153 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 ALDH16A1Q8IZ83 802 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 ICA1LQ8NDH6 482 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 NEU4Q8WWR8 484 aaPredicted RBP7.15□□□□□ -1.26
SPARC-208ENST00000538026 DUS3LQ96G46 650 aaKnown RBP7.15□□□□□ -1.26
SPARC-208ENST00000538026 WACQ9BTA9 647 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms