RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 NUFIP2Q7Z417 695 aaKnown RBP7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 TMPRSS12Q86WS5 348 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 NRMQ8IXM6 262 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 AMER3Q8N944 861 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 OR1P1Q8NH06 330 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 CASTOR1Q8WTX7 329 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 PPP1R16AQ96I34 528 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 SPATA33Q96N06 139 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 GNRHR2Q96P88 292 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 ALKBH3Q96Q83 286 aaPredicted RBP7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 GPR62Q9BZJ7 368 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 CST11Q9H112 138 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 CMC2Q9NRP2 79 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 COL4A4P53420 1690 aaPredicted RBP7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 A0A0G2JN53 185 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 H0YIZ8 118 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 H3BQ15 152 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 K7ERQ8 282 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 KLF4O43474 513 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 RAMP1O60894 148 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 SCAF4O95104 1147 aaKnown RBP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 SNAI1O95863 264 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 MMP7P09237 267 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 OR4A8P0C604 315 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 OR2T7P0C7T2 308 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 PGA4P0DJD7 388 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 PGA5P0DJD9 388 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 CXCR1P25024 350 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 CEACAM8P31997 349 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 GLIPR1P48060 266 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 GABRA4P48169 554 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 STPG1Q5TH74 334 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 ADIPOR2Q86V24 386 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 TMEM173Q86WV6 379 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 ZNF101Q8IZC7 436 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 FBXO22Q8NEZ5 403 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 OR2T27Q8NH04 317 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 SCAMP5Q8TAC9 235 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 SLC25A43Q8WUT9 341 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 TNFRSF14Q92956 283 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 IGSF8Q969P0 613 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 HCAR1Q9BXC0 346 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 KLK14Q9P0G3 267 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 USP36Q9P275 1121 aaKnown RBP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 MTCL1Q9Y4B5 1905 aaKnown RBP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 TLCD2A6NGC4 264 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 CPSF4LA6NMK7 179 aaKnown RBP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 RIIAD1A6NNX1 92 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 M0QYG6 137 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 CDC40O60508 579 aaKnown RBP eCLIP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 ALOX12BO75342 701 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 OR5H8P0DN80 308 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 NTSP30990 170 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 HOXA11P31270 313 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 CAMLGP49069 296 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 GAS6Q14393 721 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 HYAL4Q2M3T9 481 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 OR8G2PQ6IF36 304 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 CFAP161Q6P656 301 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 OPN5Q6U736 354 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 KIRREL2Q6UWL6 708 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 TMEM150AQ86TG1 271 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 KREMEN2Q8NCW0 462 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 OR2AP1Q8NGE2 309 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 VPS25Q9BRG1 176 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 ELOVL1Q9BW60 279 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 LGR4Q9BXB1 951 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 OR2J1Q9GZK6 312 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 OR52D1Q9H346 318 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 BCL2L10Q9HD36 194 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 SLC2A8Q9NY64 477 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 FOXJ2Q9P0K8 574 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 SLC25A13Q9UJS0 675 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 PCDHB8Q9UN66 801 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 PLXNA3P51805 1871 aa7.71□□□□□ -1.18
SRGAP1-202ENST00000537556 ELOA3DA6NLF2 546 aaPredicted RBP7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 B4DEV8 164 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 GEMIN2O14893 280 aaKnown RBP7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 NME2P1O60361 137 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 MPC1LP0DKB6 136 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 LIPCP11150 499 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 FGF5P12034 268 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 FOLR1P15328 257 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 RGRP47804 291 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 HIKESHIQ53FT3 197 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 COA6Q5JTJ3 125 aaKnown RBP7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 Q6ZVU0 165 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 SLC25A26Q70HW3 274 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 NXPE1Q8N323 547 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 LINC01465Q8N7H1 131 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 Q8NFD4 153 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 SUN3Q8TAQ9 357 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 DIO2Q92813 273 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 MS4A4AQ96JQ5 239 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 TP53RKQ96S44 253 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 CD180Q99467 661 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 SGPP1Q9BX95 441 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 SLC17A5Q9NRA2 495 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 PADI1Q9ULC6 663 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms