RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 AWAT1Q58HT5 328 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 ZMAT1Q5H9K5 638 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 KLF17Q5JT82 389 aaPredicted RBP7.12□□□□□ -1.27
USP28-203ENST00000537490 C1orf94Q6P1W5 598 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 FKBP9P1Q75LS8 142 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 ZER1Q7Z7L7 766 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 TREML1Q86YW5 311 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 BCL6BQ8N143 479 aaPredicted RBP7.12□□□□□ -1.27
USP28-203ENST00000537490 FAM156AQ8NDB6 213 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 NPEPL1Q8NDH3 523 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 RP9Q8TA86 221 aaKnown RBP7.12□□□□□ -1.27
USP28-203ENST00000537490 PTP4A1Q93096 173 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 RASD2Q96D21 266 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 HSH2DQ96JZ2 352 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 ZNF570Q96NI8 536 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 SIGLEC11Q96RL6 698 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 C1QTNF5Q9BXJ0 243 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 RERGLQ9H628 205 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 NMNAT1Q9HAN9 279 aaPredicted RBP7.12□□□□□ -1.27
USP28-203ENST00000537490 TUBG2Q9NRH3 451 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 PLEK2Q9NYT0 353 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 ZNF69Q9UC07 566 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 COA3Q9Y2R0 106 aaPredicted RBP7.12□□□□□ -1.27
USP28-203ENST00000537490 AP3M1Q9Y2T2 418 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 POLR3KQ9Y2Y1 108 aaPredicted RBP7.12□□□□□ -1.27
USP28-203ENST00000537490 DYSFO75923 2080 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 F5H0A9 414 aaPredicted RBP7.11□□□□□ -1.27
USP28-203ENST00000537490 TMEM178BH3BS89 294 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 XKRYO14609 159 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 GSTA4O15217 222 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 RER1O15258 196 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 WIPF1O43516 503 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 AHCYL1O43865 530 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 KHDRBS3O75525 346 aaKnown RBP7.11□□□□□ -1.27
USP28-203ENST00000537490 NDUFB2O95178 105 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 GPANK1O95872 356 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 COX4I1P13073 169 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 NCK1P16333 377 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 TNFRSF1AP19438 455 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 TNFSF4P23510 183 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 GSK3BP49841 420 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 SLC7A2P52569 658 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 BTG1P62324 171 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 AQP6Q13520 282 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 KRR1Q13601 381 aaKnown RBP7.11□□□□□ -1.27
USP28-203ENST00000537490 HLXQ14774 488 aaPredicted RBP7.11□□□□□ -1.27
USP28-203ENST00000537490 ZMYND11Q15326 602 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 TMEM155Q4W5P6 130 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 C8orf82Q6P1X6 216 aaPredicted RBP7.11□□□□□ -1.27
USP28-203ENST00000537490 RRM2BQ7LG56 351 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 ARPINQ7Z6K5 226 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 OR5AS1Q8N127 324 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 KLHL36Q8N4N3 616 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 SPICQ8N5J4 248 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 SIGLECL1Q8N7X8 197 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 ATG16L2Q8NAA4 619 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 OR1F12Q8NHA8 337 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 SGMS2Q8NHU3 365 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 SLC7A13Q8TCU3 470 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 POP5Q969H6 163 aaKnown RBP7.11□□□□□ -1.27
USP28-203ENST00000537490 ZMYND19Q96E35 227 aaPredicted RBP7.11□□□□□ -1.27
USP28-203ENST00000537490 FAM46AQ96IP4 442 aaKnown RBP7.11□□□□□ -1.27
USP28-203ENST00000537490 ZNF48Q96MX3 618 aaPredicted RBP7.11□□□□□ -1.27
USP28-203ENST00000537490 DUX5Q96PT3 197 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 OR2V2Q96R30 315 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 NUAK2Q9H093 628 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 SYT4Q9H2B2 425 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 NTN4Q9HB63 628 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 NRIP3Q9NQ35 241 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 DDX28Q9NUL7 540 aaKnown RBP7.11□□□□□ -1.27
USP28-203ENST00000537490 ARGLU1Q9NWB6 273 aaPredicted RBP7.11□□□□□ -1.27
USP28-203ENST00000537490 PTTG3PQ9NZH4 202 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 ASH2LQ9UBL3 628 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 IL19Q9UHD0 177 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 IL20RAQ9UHF4 553 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 NUP50Q9UKX7 468 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 PPP1R3CQ9UQK1 317 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 SIGLEC7Q9Y286 467 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 INSIG2Q9Y5U4 225 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 AUP1Q9Y679 476 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 ENPP4Q9Y6X5 453 aa7.11□□□□□ -1.27
USP28-203ENST00000537490 ANK2Q01484 3957 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 OR6C6A6NF89 314 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 CEACAM18A8MTB9 384 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 A8MXK9 166 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 H0YL77 283 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 SOCS2O14508 198 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 SLC22A2O15244 555 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 ZNF205O95201 554 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 H1F0P07305 194 aaKnown RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 WNT2P09544 360 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 HKR1P10072 659 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 RAC2P15153 192 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 SDHAP31040 664 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 MDH2P40926 338 aaKnown RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 CDKN2AP42771 156 aaKnown RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 OMPP47874 163 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 FXYD6P3P58550 94 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 LSM6P62312 80 aaKnown RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 GUCY1A3Q02108 690 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms