RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 JAM3Q9BX67 310 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 BLOC1S6Q9UL45 172 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 DIMT1Q9UNQ2 313 aaKnown RBP21.09■□□□□ 0.97
HMGA2-208ENST00000537429 ZNF670-ZNF695F2Z2N8 137 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 PHYHO14832 338 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 SYNGR3O43761 229 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 DOK2O60496 412 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 IGLV1-44P01699 117 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 SERPINA5P05154 406 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 ZNF85Q03923 595 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 RAB39AQ14964 217 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 RAB35Q15286 201 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 ELFN2Q5R3F8 820 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 RHOUQ7L0Q8 258 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 SSX6Q7RTT6 188 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 WFDC8Q8IUA0 241 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 ALDH16A1Q8IZ83 802 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 RNF133Q8WVZ7 376 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 IPCEF1Q8WWN9 437 aaPredicted RBP21.09■□□□□ 0.97
HMGA2-208ENST00000537429 SGCDQ92629 289 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 ZNF649Q9BS31 505 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 HDHD2Q9H0R4 259 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 NPAP1Q9NZP6 1156 aa21.09■□□□□ 0.97
HMGA2-208ENST00000537429 LRRK2Q5S007 2527 aa21.08■□□□□ 0.97
HMGA2-208ENST00000537429 COL12A1Q99715 3063 aa21.08■□□□□ 0.97
HMGA2-208ENST00000537429 PLP2Q04941 152 aa21.08■□□□□ 0.96
HMGA2-208ENST00000537429 C3orf36Q3SXR2 165 aa21.08■□□□□ 0.96
HMGA2-208ENST00000537429 STX19Q8N4C7 294 aa21.08■□□□□ 0.96
HMGA2-208ENST00000537429 ASB17Q8WXJ9 295 aa21.08■□□□□ 0.96
HMGA2-208ENST00000537429 MS4A3Q96HJ5 214 aa21.08■□□□□ 0.96
HMGA2-208ENST00000537429 DACH2Q96NX9 599 aa21.08■□□□□ 0.96
HMGA2-208ENST00000537429 INPP5EQ9NRR6 644 aa21.08■□□□□ 0.96
HMGA2-208ENST00000537429 DDX28Q9NUL7 540 aaKnown RBP21.08■□□□□ 0.96
HMGA2-208ENST00000537429 FBXL3Q9UKT7 428 aa21.08■□□□□ 0.96
HMGA2-208ENST00000537429 PRR14LQ5THK1 2151 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 DAPL1A0PJW8 107 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 OR6C6A6NF89 314 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 PRR32B1ATL7 298 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 CDK1P06493 297 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 CELA3BP08861 270 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 COX5BP10606 129 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 C21orf33P30042 268 aaPredicted RBP21.07■□□□□ 0.96
HMGA2-208ENST00000537429 KIR2DL3P43628 341 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 IDH3GP51553 393 aaPredicted RBP21.07■□□□□ 0.96
HMGA2-208ENST00000537429 ROM1Q03395 351 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 ZNF322Q6U7Q0 402 aaPredicted RBP21.07■□□□□ 0.96
HMGA2-208ENST00000537429 MYPOPQ86VE0 399 aaPredicted RBP21.07■□□□□ 0.96
HMGA2-208ENST00000537429 DMRTC2Q8IXT2 367 aaPredicted RBP21.07■□□□□ 0.96
HMGA2-208ENST00000537429 ACBD4Q8NC06 268 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 MYDGFQ969H8 173 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 SIGLEC11Q96RL6 698 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 ATF6BQ99941 703 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 CENPMQ9NSP4 180 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 ERVK13-1Q9NX77 482 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 ATPIF1Q9UII2 106 aa21.07■□□□□ 0.96
HMGA2-208ENST00000537429 IQCMA0A1B0GVH7 501 aa21.06■□□□□ 0.96
HMGA2-208ENST00000537429 ZNF878C9JN71 531 aa21.06■□□□□ 0.96
HMGA2-208ENST00000537429 CLDN1O95832 211 aa21.06■□□□□ 0.96
HMGA2-208ENST00000537429 APEX1P27695 318 aaKnown RBP21.06■□□□□ 0.96
HMGA2-208ENST00000537429 ZNF83P51522 516 aa21.06■□□□□ 0.96
HMGA2-208ENST00000537429 EGR3Q06889 387 aa21.06■□□□□ 0.96
HMGA2-208ENST00000537429 KCTD18Q6PI47 426 aaPredicted RBP21.06■□□□□ 0.96
HMGA2-208ENST00000537429 LHFPL3Q86UP9 236 aa21.06■□□□□ 0.96
HMGA2-208ENST00000537429 OR1F12Q8NHA8 337 aa21.06■□□□□ 0.96
HMGA2-208ENST00000537429 OR8B4Q96RC9 309 aa21.06■□□□□ 0.96
HMGA2-208ENST00000537429 COQ7Q99807 217 aa21.06■□□□□ 0.96
HMGA2-208ENST00000537429 TTTY10Q9BZA0 68 aa21.06■□□□□ 0.96
HMGA2-208ENST00000537429 IGHV1-18A0A0C4DH31 117 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 CASKO14936 926 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 PTHP01270 115 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 LIMS3P0CW19 117 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 LIMS4P0CW20 117 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 OPRL1P41146 370 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 HTR5AP47898 357 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 CHN2P52757 468 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 GABARAPL2P60520 117 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 GALEQ14376 348 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 ZNF684Q5T5D7 378 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 DEGS2Q6QHC5 323 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 MEX3BQ6ZN04 569 aaKnown RBP21.05■□□□□ 0.96
HMGA2-208ENST00000537429 SPATC1Q76KD6 591 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 SLCO1C1Q9NYB5 712 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 ERVK-18Q9QC07 812 aa21.05■□□□□ 0.96
HMGA2-208ENST00000537429 EXOSC1Q9Y3B2 195 aaKnown RBP21.05■□□□□ 0.96
HMGA2-208ENST00000537429 PSMD9O00233 223 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 CECR9P0C854 216 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 STOMP27105 288 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 ETV1P50549 477 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 ECH1Q13011 328 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 RSPO1Q2MKA7 263 aaPredicted RBP21.04■□□□□ 0.96
HMGA2-208ENST00000537429 LRRN1Q6UXK5 716 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 ZNF679Q8IYX0 411 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 POM121L2Q96KW2 1035 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 NGBQ9NPG2 151 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 CRIM1Q9NZV1 1036 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 LOC100509620A0A075B734 347 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 TRIM64A6NGJ6 449 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 M0R1B8 84 aa21.04■□□□□ 0.96
HMGA2-208ENST00000537429 MAGEB4O15481 346 aaPredicted RBP21.04■□□□□ 0.96
HMGA2-208ENST00000537429 EPXP11678 715 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms