RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MASP2O00187 686 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 TP53I11O14683 189 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 ICMTO60725 284 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 CPN1P15169 458 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 MECP2P51608 486 aaKnown RBP11.92□□□□□ -0.5
VPS33B-202ENST00000535906 EFNB2P52799 333 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 TMEM225Q6GV28 225 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 SLC25A25Q6KCM7 469 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 FAAP20Q6NZ36 180 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 FAM109AQ8N4B1 249 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 PLPP7Q8NBV4 271 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 KCNK15Q9H427 330 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 KLHL13Q9P2N7 655 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 SDK2Q58EX2 2172 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 A0A1W2PQ72 361 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 C9J4A7 227 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 EIF1AYO14602 144 aaKnown RBP11.91□□□□□ -0.5
VPS33B-202ENST00000535906 RAMP1O60894 148 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 NDUFB6O95139 128 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 HRGP04196 525 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 KLK2P20151 261 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 RAD52P43351 418 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 P2RX3P56373 397 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 TMEM176BQ3YBM2 270 aaPredicted RBP11.91□□□□□ -0.5
VPS33B-202ENST00000535906 ANKRD16Q6P6B7 361 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 UEVLDQ8IX04 471 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 SPICQ8N5J4 248 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 C11orf40Q8WZ69 217 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 RBP7Q96R05 134 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 PTGES2Q9H7Z7 377 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 CENPMQ9NSP4 180 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 EIF3KQ9UBQ5 218 aaKnown RBP11.91□□□□□ -0.5
VPS33B-202ENST00000535906 LOC101059948A0A1B0GTJ6 334 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 TMEM269A0A1B0GVZ9 245 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 H7C417 338 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 ZNF81P51508 661 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 SNTA1Q13424 505 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 EXT1Q16394 746 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 TCEAL6Q6IPX3 200 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 BIVMQ86UB2 503 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 OR2Y1Q8NGV0 311 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 ANGPTL6Q8NI99 470 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 TCEAL3Q969E4 200 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 SLC39A1Q9NY26 324 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 MTFP1Q9UDX5 166 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 OR52A1Q9UKL2 312 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 PCDHGA5Q9Y5G8 931 aa11.91□□□□□ -0.5
VPS33B-202ENST00000535906 PHF3Q92576 2039 aaKnown RBP11.9□□□□□ -0.5
VPS33B-202ENST00000535906 GGT3PA6NGU5 568 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 LEUTXA8MZ59 168 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 TRAF3IP2O43734 574 aaPredicted RBP11.9□□□□□ -0.5
VPS33B-202ENST00000535906 CTAG2O75638 210 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 RBBP9O75884 186 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 ALDOBP05062 364 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 IL5P05113 134 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 PGA4P0DJD7 388 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 PGA3P0DJD8 388 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 CCL3P10147 92 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 EIF1AXP47813 144 aaKnown RBP11.9□□□□□ -0.5
VPS33B-202ENST00000535906 POU3F4P49335 361 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 MFAP5Q13361 173 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 C2orf76Q3KRA6 126 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 ESCO2Q56NI9 601 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 OR1J4Q8NGS1 313 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 RNF133Q8WVZ7 376 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 SEC22CQ9BRL7 303 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 CDCP1Q9H5V8 836 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 TAS2R4Q9NYW5 299 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 CYB5R1Q9UHQ9 305 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 LOC107986453A0A1B0GWG9 222 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 LINC00862A6NCI5 91 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 TTLL8A6PVC2 850 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 SLC17A2O00624 439 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 LMX1BO60663 402 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 CD2P06729 351 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 H2BFMP0C1H6 154 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 IGFBP3P17936 291 aaPredicted RBP11.9□□□□□ -0.5
VPS33B-202ENST00000535906 ANXA7P20073 488 aaKnown RBP11.9□□□□□ -0.5
VPS33B-202ENST00000535906 ADH6P28332 368 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 FAUP35544 74 aaKnown RBP11.9□□□□□ -0.5
VPS33B-202ENST00000535906 THEM4Q5T1C6 240 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 FAM166AQ6J272 317 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 DEGS2Q6QHC5 323 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 OPN5Q6U736 354 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.9□□□□□ -0.5
VPS33B-202ENST00000535906 OR8H3Q8N146 312 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 ADPRHL1Q8NDY3 354 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 OR51A2Q8NGJ7 313 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 M1APQ8TC57 530 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 FAM3DQ96BQ1 224 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 SLC25A44Q96H78 314 aaPredicted RBP11.9□□□□□ -0.5
VPS33B-202ENST00000535906 GNRHR2Q96P88 292 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 CLEC4MQ9H2X3 399 aaPredicted RBP11.9□□□□□ -0.5
VPS33B-202ENST00000535906 PROK2Q9HC23 129 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 GPN1Q9HCN4 374 aaPredicted RBP11.9□□□□□ -0.5
VPS33B-202ENST00000535906 TAS2R8Q9NYW2 309 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 HHLA2Q9UM44 414 aa11.9□□□□□ -0.5
VPS33B-202ENST00000535906 SNRPGP15A8MWD9 76 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 G3V3Y1 287 aa11.89□□□□□ -0.51
VPS33B-202ENST00000535906 CREBL2O60519 120 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms