RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 NOP16Q9Y3C1 178 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 CACNG2Q9Y698 323 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 TEX13CA0A0J9YWL9 993 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 H7C1C5 153 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 SLC16A7O60669 478 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 ICMTO60725 284 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 RENP00797 406 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 RPS2P15880 293 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 SDHAP31040 664 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 MTNR1AP48039 350 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 NUDT2P50583 147 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 CRYBA2P53672 197 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 LSM6P62312 80 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 LCN6P62502 163 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 MALLQ13021 153 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 PSG7Q13046 419 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 TMPRSS11FQ6ZWK6 438 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 CBLL1Q75N03 491 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 VTCN1Q7Z7D3 282 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 GJC3Q8NFK1 279 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 OR2AJ1Q8NGZ0 328 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 OR13G1Q8NGZ3 307 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 GTF3AQ92664 365 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 APOBEC3DQ96AK3 386 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 NMD3Q96D46 503 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 CMBLQ96DG6 245 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 CMTM5Q96DZ9 223 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 HSH2DQ96JZ2 352 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 TMPRSS13Q9BYE2 586 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 NMNAT1Q9HAN9 279 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 ASH2LQ9UBL3 628 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 EGFL7Q9UHF1 273 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 IL20RAQ9UHF4 553 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 NUP50Q9UKX7 468 aa11.22□□□□□ -0.61
CLSTN3-205ENST00000535452 IGKV1D-43A0A0B4J1Z2 117 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 TMEM89A2RUT3 159 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 DEAF1O75398 565 aaPredicted RBP11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 NGFP01138 241 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 HLA-DQA2P01906 255 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 RAC2P15153 192 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 COMPP49747 757 aaPredicted RBP11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 SLC7A2P52569 658 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 GNB2P62879 340 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 CDK5R2Q13319 367 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 SLC36A3Q495N2 470 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 FOXL2NBQ6ZUU3 175 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 POU5F2Q8N7G0 328 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 CLDN22Q8N7P3 220 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 OR11L1Q8NGX0 322 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 OR1F12Q8NHA8 337 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 C22orf15Q8WYQ4 148 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 SLC25A28Q96A46 364 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 FAM46AQ96IP4 442 aaKnown RBP11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 Q96M85 177 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 OR2V2Q96R30 315 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 PLA2G12AQ9BZM1 189 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 NSRP1Q9H0G5 558 aaKnown RBP11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 HDHD2Q9H0R4 259 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 SYT4Q9H2B2 425 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 PATZ1Q9HBE1 687 aaKnown RBP11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 ATPIF1Q9UII2 106 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 LRCH1Q9Y2L9 728 aa11.21□□□□□ -0.61
CLSTN3-205ENST00000535452 A0A087WUU8 490 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 J3KTA2 159 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 SOCS2O14508 198 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 COX4I1P13073 169 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 RHCEP18577 417 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 KITLGP21583 273 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 ZNF154Q13106 437 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 BAMBIQ13145 260 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 ENDOGQ14249 297 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 KCNJ8Q15842 424 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 LRRN1Q6UXK5 716 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 DPY19L2P2Q6ZN68 376 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 VASH1Q7L8A9 365 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 OR5AS1Q8N127 324 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 FAM156AQ8NDB6 213 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 HAVCR1Q96D42 359 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 RSRC1Q96IZ7 334 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 ARMCX1Q9P291 453 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 MIOXQ9UGB7 285 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 TMCC3Q9ULS5 477 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 ADAM18Q9Y3Q7 739 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 PPIAL4AQ9Y536 164 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 ENPP4Q9Y6X5 453 aa11.2□□□□□ -0.62
CLSTN3-205ENST00000535452 UNC119BA6NIH7 251 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 IGHV2-70P01814 119 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 SLC6A6P31641 620 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 ECH1Q13011 328 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 SHISA2Q6UWI4 295 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 LRRC28Q86X40 367 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 SLC15A3Q8IY34 581 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 ZNF283Q8N7M2 679 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 LRRC75AQ8NAA5 344 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 OR8B3Q8NGG8 313 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 OR52E2Q8NGJ4 325 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 OR4C15Q8NGM1 316 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 SPRYD4Q8WW59 207 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 ITLN1Q8WWA0 313 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms