RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 ASCL1P50553 236 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 PLK5Q496M5 336 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 Q499Y3 187 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 DPY19L2P2Q6ZN68 376 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 NIPSNAP3BQ9BS92 247 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 MED18Q9BUE0 208 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 BARHL1Q9BZE3 327 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 SLCO5A1Q9H2Y9 848 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 A0A1W2PR48 441 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 M0R082 166 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 SLC25A6P12236 298 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 OR2B8PP59922 312 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 FUNDC1Q8IVP5 155 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 SLC35B4Q969S0 331 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 LYSMD1Q96S90 227 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 SRRQ9GZT4 340 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 KIR3DX1Q9H7L2 352 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 MRPS2Q9Y399 296 aaKnown RBP11.53□□□□□ -0.56
SPG11-203ENST00000535302 A0A1W2PR80 420 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 FGF17O60258 216 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 SCG5P05408 212 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 SPINK9Q5DT21 86 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 TOR2AQ5JU69 321 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 METRNLQ641Q3 311 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 PAQR6Q6TCH4 344 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 TMEM178AQ8NBL3 297 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 NANPQ8TBE9 248 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 APH1BQ8WW43 257 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 CSAG2Q9Y5P2 127 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 PTBP3O95758 552 aaKnown RBP11.53□□□□□ -0.56
SPG11-203ENST00000535302 CSN1S1P47710 185 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 SPRED1Q7Z699 444 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 A0A1W2PRD5 423 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 A0A1W2PRF3 423 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 A0A1W2PRM7 423 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 MPGP29372 298 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 GAMTQ14353 236 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 OR13C5Q8NGS8 318 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 OR51E1Q8TCB6 317 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 HAVCR2Q8TDQ0 301 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 ELSPBP1Q96BH3 223 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 ZDHHC5Q9C0B5 715 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 MOKQ9UQ07 419 aa11.53□□□□□ -0.56
SPG11-203ENST00000535302 IGHEP01854 428 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 HTR1FP30939 366 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 RPL13AP40429 203 aaKnown RBP11.52□□□□□ -0.56
SPG11-203ENST00000535302 C9orf50Q5SZB4 431 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 RTL10Q7L3V2 364 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 TMEM99Q8N816 258 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 MAGT1Q9H0U3 335 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 SIAEQ9HAT2 523 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 MRPS14O60783 128 aaKnown RBP11.52□□□□□ -0.56
SPG11-203ENST00000535302 WDR1O75083 606 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 TGFBR1P36897 503 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 CCR2P41597 374 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 FCN2Q15485 313 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 APH1AQ96BI3 265 aa11.52□□□□□ -0.56
SPG11-203ENST00000535302 OR2J2O76002 312 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 HLA-HP01893 362 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 RAB40ALP0C0E4 278 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 ST6GAL1P15907 406 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 TBPP20226 339 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 IL3RAP26951 378 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 MRPS10P82664 201 aaKnown RBP11.52□□□□□ -0.57
SPG11-203ENST00000535302 PLXDC2Q6UX71 529 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 ZNF596Q8TC21 504 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 RAB40AQ8WXH6 277 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 FAM3DQ96BQ1 224 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 TMEM30AQ9NV96 361 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 IGKV3-7A0A075B6H7 116 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 SRMP19623 302 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 CPT2P23786 658 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 ETV1P50549 477 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 H3F3CQ6NXT2 135 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 GPR119Q8TDV5 335 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 ATF6BQ99941 703 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 SOX7Q9BT81 388 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 UBE2ZQ9H832 354 aaPredicted RBP11.52□□□□□ -0.57
SPG11-203ENST00000535302 KCNIP2Q9NS61 270 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 AK3Q9UIJ7 227 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 DBX1A6NMT0 343 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 HMGN4O00479 90 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 LIPAP38571 399 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 KRTDAPP60985 99 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 FOXC1Q12948 553 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 MDGA2Q7Z553 956 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 DTWD2Q8NBA8 298 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 OR1J2Q8NGS2 313 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 TMEM230Q96A57 120 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 YKT6O15498 198 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 CTSLP07711 333 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 ALOX5APP20292 161 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 S100A7P31151 101 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 EMDP50402 254 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 GFERP55789 205 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 RIPPLY1Q0D2K3 151 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 FGF14Q92915 247 aa11.52□□□□□ -0.57
SPG11-203ENST00000535302 OR6C68A6NDL8 312 aa11.51□□□□□ -0.57
SPG11-203ENST00000535302 GLRA1P23415 457 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms