RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MRPL43Q8N983 215 aaKnown RBP-0.2□□□□□ -2.44
COPB1-212ENST00000534771 OR4M1Q8NGD0 313 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 OR52B4Q8NGK2 314 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 OR4C13Q8NGP0 309 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 OR1F12Q8NHA8 337 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 ZNF606Q8WXB4 792 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 CPNE4Q96A23 557 aaPredicted RBP-0.2□□□□□ -2.44
COPB1-212ENST00000534771 ERP27Q96DN0 273 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 GALNT14Q96FL9 552 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 ZNF75AQ96N20 296 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 OR8B4Q96RC9 309 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 SECISBP2Q96T21 854 aaKnown RBP-0.2□□□□□ -2.44
COPB1-212ENST00000534771 FICDQ9BVA6 458 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 MFFQ9GZY8 342 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 SYTL2Q9HCH5 934 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 CTNNA3Q9UI47 895 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 RPH3ALQ9UNE2 315 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 MGAT4BQ9UQ53 548 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 KCNIP3Q9Y2W7 256 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 CDHR2Q9BYE9 1310 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 DOCK10Q96BY6 2186 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 RGS12O14924 1447 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 NCAPD2Q15021 1401 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 A0A1B0GUH1 482 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 MYBPHLA2RUH7 354 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 GABRR3A8MPY1 467 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 NDUFC2-KCTD14E9PQ53 114 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 CCL21O00585 134 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 POLR2DO15514 142 aaKnown RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 CLDN3O15551 220 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 EIF4E2O60573 245 aaKnown RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 KINO60870 393 aaKnown RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 SCO1O75880 301 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 PABPC4LP0CB38 370 aaKnown RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 CCDC192P0DO97 292 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 CD37P11049 281 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 CTRB1P17538 263 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 PRPS1L1P21108 318 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 PAX7P23759 505 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 ATP5DP30049 168 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 SFNP31947 248 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 RPL13AP40429 203 aaKnown RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 TGM4P49221 684 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 PRMT2P55345 433 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 GFERP55789 205 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 CMC4P56277 68 aaPredicted RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 TWF1Q12792 350 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 ILKQ13418 452 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 RCAN2Q14206 197 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 MESDQ14696 234 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 GANABQ14697 944 aaKnown RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 LDLRAD2Q5SZI1 272 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 LIN9Q5TKA1 542 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 FAM131AQ6UXB0 335 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 CATSPER4Q7RTX7 472 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 CDR2LQ86X02 465 aaPredicted RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 SLC38A6Q8IZM9 456 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 EID2Q8N6I1 236 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 OR2Z1Q8NG97 314 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 SPRYD4Q8WW59 207 aaPredicted RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 FAM3CQ92520 227 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 SLC25A44Q96H78 314 aaPredicted RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 HSFY1Q96LI6 401 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 TTC25Q96NG3 672 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 MRPL13Q9BYD1 178 aaKnown RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 XPO4Q9C0E2 1151 aaKnown RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 VSIRQ9H7M9 311 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 MID1IP1Q9NPA3 183 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 SMOXQ9NWM0 555 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 CWC25Q9NXE8 425 aaPredicted RBP-0.21□□□□□ -2.44
COPB1-212ENST00000534771 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP-0.21□□□□□ -2.441e-13■■□□□ 14.1
COPB1-212ENST00000534771 BFARQ9NZS9 450 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 RWDD2AQ9UIY3 292 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 MAPK8IP3Q9UPT6 1336 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 PNPLA6Q8IY17 1366 aa-0.21□□□□□ -2.44
COPB1-212ENST00000534771 BAZ1BQ9UIG0 1483 aaKnown RBP-0.22□□□□□ -2.44
COPB1-212ENST00000534771 IGKV1-9A0A0C4DH69 117 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 A8MWL6 223 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 LEUTXA8MZ59 168 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 H3BQ85 93 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 BTN3A3O00478 584 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 SLC31A1O15431 190 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 MED7O43513 233 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 GATBO75879 557 aaKnown RBP-0.22□□□□□ -2.44
COPB1-212ENST00000534771 ERLIN2O94905 339 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 MT-ATP6P00846 226 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 OR5H8P0DN80 308 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 GZMBP10144 247 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 ZNF708P17019 499 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 TNNI3P19429 210 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 F2RP25116 425 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 CHMLP26374 656 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 ATP5C1P36542 298 aaKnown RBP-0.22□□□□□ -2.44
COPB1-212ENST00000534771 PRPHP41219 470 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 OR1G1P47890 313 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 TAS2R43P59537 309 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 RPL23P62829 140 aaKnown RBP-0.22□□□□□ -2.44
COPB1-212ENST00000534771 ELF3P78545 371 aaPredicted RBP-0.22□□□□□ -2.44
COPB1-212ENST00000534771 SIGLEC14Q08ET2 396 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 PJVKQ0ZLH3 352 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms