RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TFP02787 698 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 DBHP09172 617 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 GAAP10253 952 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 ATP6V1B2P21281 511 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 FPR3P25089 353 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 NOS3P29474 1203 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 CRABP1P29762 137 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 IFNGR2P38484 337 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 CRYBB2P43320 205 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 MMP15P51511 669 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 MNAT1P51948 309 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 DVL1P1P54792 670 aaPredicted RBP8.88□□□□□ -0.99
CAPN1-225ENST00000533704 PSG7Q13046 419 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 HNRNPA0Q13151 305 aaKnown RBP8.88□□□□□ -0.99
CAPN1-225ENST00000533704 RFX4Q33E94 735 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 MBNL2Q5VZF2 373 aaKnown RBP8.88□□□□□ -0.99
CAPN1-225ENST00000533704 CORO6Q6QEF8 472 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 PHC2Q8IXK0 858 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 NPEPL1Q8NDH3 523 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 SDR9C7Q8NEX9 313 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 OR1F12Q8NHA8 337 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 GNPDA2Q8TDQ7 276 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 TMEM158Q8WZ71 300 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 TIMD4Q96H15 378 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 CCT8L2Q96SF2 557 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 NMNAT3Q96T66 252 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 FUZQ9BT04 418 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 WACQ9BTA9 647 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 FN3KQ9H479 309 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 RPRD1BQ9NQG5 326 aaKnown RBP8.88□□□□□ -0.99
CAPN1-225ENST00000533704 CYSLTR2Q9NS75 346 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 HIF1ANQ9NWT6 349 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 STARD10Q9Y365 291 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 DOCK11Q5JSL3 2073 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 H3BSA7 217 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 TNFRSF11BO00300 401 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 DCTN6O00399 190 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 RER1O15258 196 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 TXNDC12O95881 172 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 MSMBP08118 114 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 COX5BP10606 129 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 PCMT1P22061 227 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 LIPAP38571 399 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 LSM6P62312 80 aaKnown RBP8.87□□□□□ -0.99
CAPN1-225ENST00000533704 TNFAIP6P98066 277 aaPredicted RBP8.87□□□□□ -0.99
CAPN1-225ENST00000533704 CCDC92Q53HC0 331 aaPredicted RBP8.87□□□□□ -0.99
CAPN1-225ENST00000533704 SPRNQ5BIV9 151 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 ZMAT1Q5H9K5 638 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 MTX3Q5HYI7 312 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 FAM209AQ5JX71 171 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 CLEC12AQ5QGZ9 265 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 SLC35F1Q5T1Q4 408 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 SHQ1Q6PI26 577 aaKnown RBP8.87□□□□□ -0.99
CAPN1-225ENST00000533704 C1orf174Q8IYL3 243 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 OR5AS1Q8N127 324 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 FITM2Q8N6M3 262 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 OR2Z1Q8NG97 314 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 OR9Q2Q8NGE9 314 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 OR51F2Q8NH61 342 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 SPATA3Q8NHX4 192 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 RAB1CQ92928 201 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 TMEM186Q96B77 213 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 CMBLQ96DG6 245 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 NSL1Q96IY1 281 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 DCLRE1CQ96SD1 692 aaKnown RBP8.87□□□□□ -0.99
CAPN1-225ENST00000533704 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
CAPN1-225ENST00000533704 RACGAP1Q9H0H5 632 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 ZNF665Q9H7R5 613 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 IL1RAPQ9NPH3 570 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 TBCCD1Q9NVR7 557 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 UBAP1Q9NZ09 502 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 PTTG3PQ9NZH4 202 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 PURGQ9UJV8 347 aaKnown RBP8.87□□□□□ -0.99
CAPN1-225ENST00000533704 B9D1Q9UPM9 204 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 WIPI2Q9Y4P8 454 aa8.87□□□□□ -0.99
CAPN1-225ENST00000533704 IGLV1-36A0A0B4J1U3 117 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 OR6C6A6NF89 314 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 HIST1H1CP16403 213 aaKnown RBP8.86□□□□□ -0.99
CAPN1-225ENST00000533704 TNFSF4P23510 183 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 GSSP48637 474 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 ERFP50548 548 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 LMO4P61968 165 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.86□□□□□ -0.99
CAPN1-225ENST00000533704 PPP1R8Q12972 351 aaKnown RBP8.86□□□□□ -0.99
CAPN1-225ENST00000533704 TSPAN31Q12999 210 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 HLXQ14774 488 aaPredicted RBP8.86□□□□□ -0.99
CAPN1-225ENST00000533704 SPATS1Q496A3 300 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 FAHD2BQ6P2I3 314 aaPredicted RBP8.86□□□□□ -0.99
CAPN1-225ENST00000533704 PGBD2Q6P3X8 592 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 PGM2L1Q6PCE3 622 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 ZNF620Q6ZNG0 422 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 DHFR2Q86XF0 187 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 LINC00346Q8IVM7 164 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 OR6V1Q8N148 313 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 CCDC197Q8NCU1 140 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 GJC3Q8NFK1 279 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 OR52L1Q8NGH7 329 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 OR52E2Q8NGJ4 325 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 OR2AJ1Q8NGZ0 328 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 RAB39BQ96DA2 213 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms