RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 C1orf94Q6P1W5 598 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 FAHD2BQ6P2I3 314 aaPredicted RBP13.12□□□□□ -0.31
CPSF1-211ENST00000533492 SHQ1Q6PI26 577 aaKnown RBP13.12□□□□□ -0.31
CPSF1-211ENST00000533492 DNM1P34Q6PK57 102 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 VASH1Q7L8A9 365 aaPredicted RBP13.12□□□□□ -0.31
CPSF1-211ENST00000533492 FAHD2AQ96GK7 314 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 COG8Q96MW5 612 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 ERMAPQ96PL5 475 aaPredicted RBP13.12□□□□□ -0.31
CPSF1-211ENST00000533492 ASH2LQ9UBL3 628 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 TAGLN3Q9UI15 199 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 KLHL21Q9UJP4 597 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 TMCC3Q9ULS5 477 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 ARL2BPQ9Y2Y0 163 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 ISPDA4D126 451 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 IMPA2O14732 288 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 PPP1R3DO95685 299 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 TXNDC12O95881 172 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 FABP3P05413 133 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 ADH4P08319 380 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 TNFSF4P23510 183 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 SLC6A6P31641 620 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 IFNGR2P38484 337 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 FXYD6P3P58550 94 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 TNFAIP6P98066 277 aaPredicted RBP13.11□□□□□ -0.31
CPSF1-211ENST00000533492 RFX4Q33E94 735 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 C16orf89Q6UX73 402 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 PTCHD4Q6ZW05 846 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.11□□□□□ -0.31
CPSF1-211ENST00000533492 JAZF1Q86VZ6 243 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 OR1F12Q8NHA8 337 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 FANK1Q8TC84 345 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 SLC7A6Q92536 515 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 PTP4A1Q93096 173 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 CMBLQ96DG6 245 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 GPA33Q99795 319 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 C19orf24Q9BVV8 132 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 OCEL1Q9H607 264 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 METTL17Q9H7H0 456 aaPredicted RBP13.11□□□□□ -0.31
CPSF1-211ENST00000533492 SRA1Q9HD15 236 aaKnown RBP13.11□□□□□ -0.31
CPSF1-211ENST00000533492 NDE1Q9NXR1 346 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 CD300AQ9UGN4 299 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 PURGQ9UJV8 347 aaKnown RBP13.11□□□□□ -0.31
CPSF1-211ENST00000533492 STARD10Q9Y365 291 aa13.11□□□□□ -0.31
CPSF1-211ENST00000533492 DCTN3O75935 186 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 UBOX5O94941 541 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 RENP00797 406 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 NOS3P29474 1203 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 GYS2P54840 703 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 SCGB2A2Q13296 93 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 LEG1Q6P5S2 330 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 PGM2L1Q6PCE3 622 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 DEFB107AQ8IZN7 70 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 GJC3Q8NFK1 279 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 OR5L1Q8NGL2 311 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 TSSK2Q96PF2 358 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 GAL3ST1Q99999 423 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 FUZQ9BT04 418 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 IFT27Q9BW83 186 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 OR52D1Q9H346 318 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 ARL8BQ9NVJ2 186 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 B9D1Q9UPM9 204 aa13.1□□□□□ -0.31
CPSF1-211ENST00000533492 OR6C6A6NF89 314 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 ARPC2O15144 300 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 RER1O15258 196 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 PLPP2O43688 288 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 PNPP00491 289 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 SEMG1P04279 462 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 CD55P08174 381 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 TNFRSF1AP19438 455 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 FPR3P25089 353 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 RRM2P31350 389 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 RGS6P49758 472 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 CDK5R2Q13319 367 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 KCNMB1Q16558 191 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 CCDC92Q53HC0 331 aaPredicted RBP13.09□□□□□ -0.31
CPSF1-211ENST00000533492 TEX29Q8N6K0 151 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 OR2Z1Q8NG97 314 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 OR4K13Q8NH42 304 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 GNPDA2Q8TDQ7 276 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 HAVCR1Q96D42 359 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 SAMD8Q96LT4 415 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 DCLRE1CQ96SD1 692 aaKnown RBP13.09□□□□□ -0.31
CPSF1-211ENST00000533492 POFUT1Q9H488 388 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 IL1RAPQ9NPH3 570 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 UBAP1Q9NZ09 502 aa13.09□□□□□ -0.31
CPSF1-211ENST00000533492 A0A0G2JMP0 313 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 A0A0X1KG70 313 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 DCTN6O00399 190 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 ARPC3O15145 178 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 SURF4O15260 269 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 DEAF1O75398 565 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-211ENST00000533492 GPANK1O95872 356 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 IGHV2-5P01817 119 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 DBHP09172 617 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 KITLGP21583 273 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 MNAT1P51948 309 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 MEP1BQ16820 701 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 SPATS1Q496A3 300 aa13.08□□□□□ -0.32
CPSF1-211ENST00000533492 ZNF771Q7L3S4 317 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-211ENST00000533492 PIGWQ7Z7B1 504 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms