RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 OR4Q2P0C623 313 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 EPXP11678 715 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 ZNF17P17021 662 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 TCN2P20062 427 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 SERTAD2Q14140 314 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 PRRT3Q5FWE3 981 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 SLCO4A1Q96BD0 722 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 SAT2Q96F10 170 aaPredicted RBP7.21□□□□□ -1.25
CSRP1-218ENST00000533402 NIPSNAP1Q9BPW8 284 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 PLEKHA2Q9HB19 425 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 SPTBP11277 2137 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.21□□□□□ -1.25
CSRP1-218ENST00000533402 C1orf226A1L170 272 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 A6NDN8 102 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 B4E171 279 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 ZNF593O00488 134 aaPredicted RBP7.21□□□□□ -1.25
CSRP1-218ENST00000533402 OR2T7P0C7T2 308 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 NAGAP17050 411 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 EFNA3P52797 238 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 ZNF805Q5CZA5 627 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 BCDIN3DQ7Z5W3 292 aaKnown RBP7.21□□□□□ -1.25
CSRP1-218ENST00000533402 CMTM8Q8IZV2 173 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 OR2T27Q8NH04 317 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 LMO3Q8TAP4 145 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 KLK6Q92876 244 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 PCYT2Q99447 389 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 TMEM59Q9BXS4 323 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 GPR61Q9BZJ8 451 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 MTCH1Q9NZJ7 389 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 PPP1R3CQ9UQK1 317 aa7.21□□□□□ -1.25
CSRP1-218ENST00000533402 MTCL1Q9Y4B5 1905 aaKnown RBP7.21□□□□□ -1.26
CSRP1-218ENST00000533402 E5RGE8 158 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 NID1P14543 1247 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 GABRA4P48169 554 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 ERVFRD-1P60508 538 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 KCNJ10P78508 379 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 RUNX3Q13761 415 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 YOD1Q5VVQ6 348 aaPredicted RBP7.21□□□□□ -1.26
CSRP1-218ENST00000533402 NSUN5P2Q63ZY6 315 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 FIGLAQ6QHK4 219 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 GLDNQ6ZMI3 551 aaPredicted RBP7.21□□□□□ -1.26
CSRP1-218ENST00000533402 MS4A3Q96HJ5 214 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 ALG12Q9BV10 488 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 UBTD1Q9HAC8 227 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 OR6C3Q9NZP0 311 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 LHX6Q9UPM6 363 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 NSG2Q9Y328 171 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 AIFM1O95831 613 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 HOXA11P31270 313 aaPredicted RBP7.21□□□□□ -1.26
CSRP1-218ENST00000533402 BMI1P35226 326 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 MRPS21P82921 87 aaKnown RBP7.21□□□□□ -1.26
CSRP1-218ENST00000533402 TSPAN31Q12999 210 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 MAMDC2Q7Z304 686 aaPredicted RBP7.21□□□□□ -1.26
CSRP1-218ENST00000533402 PNPLA1Q8N8W4 532 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 LHX4Q969G2 390 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 CSNK1G1Q9HCP0 422 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 PITPNC1Q9UKF7 332 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 SDK1Q7Z5N4 2213 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 TRAV27A0A087WT01 109 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 RNGTTO60942 597 aaKnown RBP7.21□□□□□ -1.26
CSRP1-218ENST00000533402 RPS24P62847 133 aaKnown RBP7.21□□□□□ -1.26
CSRP1-218ENST00000533402 SNRPNP63162 240 aaKnown RBP7.21□□□□□ -1.26
CSRP1-218ENST00000533402 SLC35A1P78382 337 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 IL1F10Q8WWZ1 152 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 SELENOIQ9C0D9 397 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 MYOTQ9UBF9 498 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 SCN2AQ99250 2005 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 FBLL1A6NHQ2 334 aaKnown RBP7.21□□□□□ -1.26
CSRP1-218ENST00000533402 WNT11O96014 354 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 CRABP1P29762 137 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 RPS23P62266 143 aaKnown RBP7.21□□□□□ -1.26
CSRP1-218ENST00000533402 EVX2Q03828 476 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 SAPCD1Q5SSQ6 148 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 OPALINQ96PE5 141 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 MARVELD1Q9BSK0 173 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 WASHC3Q9Y3C0 194 aa7.21□□□□□ -1.26
CSRP1-218ENST00000533402 B4GALT2O60909 372 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 DTYMKP23919 212 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 SPCS3P61009 180 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 ST3GAL2Q16842 350 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 ATP6V1FQ16864 119 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 STARD4Q96DR4 205 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 ADGRG7Q96K78 797 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 C19orf43Q9BQ61 176 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 AKIRIN1Q9H9L7 192 aaPredicted RBP7.2□□□□□ -1.26
CSRP1-218ENST00000533402 PLXNB2O15031 1838 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 A0A1B0GTQ1 180 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 HEPACAM2A8MVW5 462 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 LEFTY2O00292 366 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 NXPH3O95157 252 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 PPOXP50336 477 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 ADGRE4PQ86SQ3 457 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 C1QTNF6Q9BXI9 259 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 CHST11Q9NPF2 352 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 MYO7AQ13402 2215 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 TRPM6Q9BX84 2022 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 TBXA2RP21731 343 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 SKP2Q13309 424 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 GPR18Q14330 331 aa7.2□□□□□ -1.26
CSRP1-218ENST00000533402 ZNF362Q5T0B9 420 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms