RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 SRMP19623 302 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 NFYBP25208 207 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 FABP6P51161 128 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 SRPXP78539 464 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 GLYATL3Q5SZD4 288 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 TMPRSS7Q7RTY8 843 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 SSX3Q99909 188 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 KIAA1217Q5T5P2 1943 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 A0A1W2PS29 197 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF133P52736 654 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-221ENST00000532331 DOK3Q7L591 496 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF546Q86UE3 836 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 DEFB108BQ8NET1 73 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 ANKRD33BA6NCL7 494 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 ACHEP22303 614 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 ALDH3B1P43353 468 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 SLC23A3Q6PIS1 610 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 DRAXINQ8NBI3 349 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-221ENST00000532331 LRFN5Q96NI6 719 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 ASH2LQ9UBL3 628 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 PRR33A8MZF0 331 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 MSTNO14793 375 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF728P0DKX0 622 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 SNCAP37840 140 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 RELAQ04206 551 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 PDLIM3Q53GG5 364 aaPredicted RBP10.23□□□□□ -0.77
PTPRK-221ENST00000532331 SYT6Q5T7P8 510 aaPredicted RBP10.23□□□□□ -0.77
PTPRK-221ENST00000532331 B3GNTL1Q67FW5 361 aaPredicted RBP10.23□□□□□ -0.77
PTPRK-221ENST00000532331 ANKRD9Q96BM1 317 aaPredicted RBP10.23□□□□□ -0.77
PTPRK-221ENST00000532331 ABHD6Q9BV23 337 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 POLDIP2Q9Y2S7 368 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 E9PI62 339 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 AGPAT2O15120 278 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 HYAL3O43820 417 aaPredicted RBP10.23□□□□□ -0.77
PTPRK-221ENST00000532331 SLC2A1P11166 492 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 PTAFRP25105 342 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 MRPL19P49406 292 aaKnown RBP10.23□□□□□ -0.77
PTPRK-221ENST00000532331 SRP9P49458 86 aaKnown RBP10.23□□□□□ -0.77
PTPRK-221ENST00000532331 PRSS41Q7RTY9 318 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 RDH10Q8IZV5 341 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 HRASLSQ9HDD0 168 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 FBXO8Q9NRD0 319 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 MED29Q9NX70 200 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 SLC5A6Q9Y289 635 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 TUSC2O75896 110 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 SBK2P0C263 348 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 KITLGP21583 273 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 SDHAP31040 664 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 GLIPR1L1Q6UWM5 242 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 ARIH2OSQ8N7S6 290 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 BCL2L10Q9HD36 194 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 CLEC2DQ9UHP7 191 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 TEX51A0A1B0GUA7 166 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 LAP3P28838 519 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 RPL18Q07020 188 aaKnown RBP10.23□□□□□ -0.77
PTPRK-221ENST00000532331 GALEQ14376 348 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 NANOGP1Q8N7R0 232 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 FAM71CQ8NEG0 241 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 HMGCLL1Q8TB92 370 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 TRMT61AQ96FX7 289 aaKnown RBP10.23□□□□□ -0.77
PTPRK-221ENST00000532331 SLC25A37Q9NYZ2 338 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 NTNG1Q9Y2I2 539 aa10.23□□□□□ -0.77
PTPRK-221ENST00000532331 TMEM129A0AVI4 362 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 DEGS1O15121 323 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 EIF4EP06730 217 aaKnown RBP10.22□□□□□ -0.77
PTPRK-221ENST00000532331 GUSBP08236 651 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 PIPP12273 146 aaPredicted RBP10.22□□□□□ -0.77
PTPRK-221ENST00000532331 B4GALT1P15291 398 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 RPS27AP62979 156 aaKnown RBP10.22□□□□□ -0.77
PTPRK-221ENST00000532331 UBA52P62987 128 aaKnown RBP10.22□□□□□ -0.77
PTPRK-221ENST00000532331 DCAF10Q5QP82 559 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 C19orf48Q6RUI8 117 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF620Q6ZNG0 422 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 MDGA2Q7Z553 956 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 MRGPREQ86SM8 312 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 PLPP7Q8NBV4 271 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 OR51D1Q8NGF3 324 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 SCN1AP35498 2009 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 K7EPK0 472 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 CHATP28329 748 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 PEA15Q15121 130 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 STEAP1BQ6NZ63 245 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 FAM185AQ8N0U4 392 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 FAM71E2Q8N5Q1 922 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 OR4A16Q8NH70 328 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 SMAP2Q8WU79 429 aaPredicted RBP10.22□□□□□ -0.77
PTPRK-221ENST00000532331 AP1S3Q96PC3 154 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 CMC2Q9NRP2 79 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 TRIOBPQ9H2D6 2365 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 DHHO43323 396 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 SRD5A2P31213 254 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 SRP14P37108 136 aaKnown RBP10.22□□□□□ -0.77
PTPRK-221ENST00000532331 TGM4P49221 684 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 TAS2R30P59541 319 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 UBE2IP63279 158 aaKnown RBP10.22□□□□□ -0.77
PTPRK-221ENST00000532331 SORDQ00796 357 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 RAB35Q15286 201 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 PAN3Q58A45 887 aaKnown RBP10.22□□□□□ -0.77
PTPRK-221ENST00000532331 ANGPTL5Q86XS5 388 aa10.22□□□□□ -0.77
PTPRK-221ENST00000532331 SULT1C2O00338 296 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms