RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 RASD2Q96D21 266 aa18.88■□□□□ 0.61
TRAPPC4-210ENST00000531290 KRCC1Q9NPI7 259 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC4-210ENST00000531290 PLEK2Q9NYT0 353 aa18.88■□□□□ 0.61
TRAPPC4-210ENST00000531290 UBAP1Q9NZ09 502 aa18.88■□□□□ 0.61
TRAPPC4-210ENST00000531290 NDUFAF4Q9P032 175 aa18.88■□□□□ 0.61
TRAPPC4-210ENST00000531290 AURKCQ9UQB9 309 aa18.88■□□□□ 0.61
TRAPPC4-210ENST00000531290 ANK2Q01484 3957 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 J3QLI3 93 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 HSD17B1P14061 328 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 CDK5R2Q13319 367 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 AQP6Q13520 282 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 C1orf229Q6ZS94 237 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 VASH1Q7L8A9 365 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 ST7LQ8TDW4 575 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 ZFAND2BQ8WV99 257 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 COG8Q96MW5 612 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 SYT4Q9H2B2 425 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 GORASP2Q9H8Y8 452 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 NRIP3Q9NQ35 241 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 DCAF13Q9NV06 445 aaKnown RBP18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 FAM53CQ9NYF3 392 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 PURGQ9UJV8 347 aaKnown RBP18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 PCDHB10Q9UN67 800 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 SIGLEC7Q9Y286 467 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 COA3Q9Y2R0 106 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 IER3IP1Q9Y5U9 82 aa18.87■□□□□ 0.61
TRAPPC4-210ENST00000531290 B2RBV5 119 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 RGS9O75916 674 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 AVPP01185 164 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 SBK2P0C263 348 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 EPHA1P21709 976 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 GATA3P23771 443 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 LSM6P62312 80 aaKnown RBP18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 C1orf94Q6P1W5 598 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 C12orf54Q6X4T0 127 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 ADCK1Q86TW2 530 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 OR2Z1Q8NG97 314 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 CMBLQ96DG6 245 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 RSRC1Q96IZ7 334 aaKnown RBP18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 DCLRE1CQ96SD1 692 aaKnown RBP18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 TMPRSS13Q9BYE2 586 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 ASH2LQ9UBL3 628 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 IL20RAQ9UHF4 553 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 STARD10Q9Y365 291 aa18.86■□□□□ 0.61
TRAPPC4-210ENST00000531290 SOCS2O14508 198 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 TNFRSF1AP19438 455 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 CALB2P22676 271 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 OMPP47874 163 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 LIMS1P48059 325 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 RPS6KA3P51812 740 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 SPRNQ5BIV9 151 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 DPY19L2P2Q6ZN68 376 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 OR1F12Q8NHA8 337 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 NANPQ8TBE9 248 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 PTP4A1Q93096 173 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 MCUR1Q96AQ8 359 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 HAVCR1Q96D42 359 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 NSMCE2Q96MF7 247 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 GPX7Q96SL4 187 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 POFUT1Q9H488 388 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 C7orf69Q9H7B7 122 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 VSX1Q9NZR4 365 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 NPTNQ9Y639 398 aa18.85■□□□□ 0.61
TRAPPC4-210ENST00000531290 TRBV4-1A0A0J9YWV2 114 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 UNC119BA6NIH7 251 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 SURF4O15260 269 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 KITLGP21583 273 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 CENPAP49450 140 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 LCN2P80188 198 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 OTPQ5XKR4 325 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 USP43Q70EL4 1123 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 C1QL2Q7Z5L3 287 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 SEMA6DQ8NFY4 1073 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 OR52J3Q8NH60 311 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 BCAS4Q8TDM0 211 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 SLC7A6Q92536 515 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 C7orf34Q96L11 122 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 SAMD8Q96LT4 415 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 JMJD8Q96S16 334 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 NUAK2Q9H093 628 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 TMEM106BQ9NUM4 274 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 POLR1DQ9Y2S0 133 aa18.84■□□□□ 0.61
TRAPPC4-210ENST00000531290 FOXH1O75593 365 aa18.83■□□□□ 0.6
TRAPPC4-210ENST00000531290 DIRAS1O95057 198 aa18.83■□□□□ 0.6
TRAPPC4-210ENST00000531290 SMIM11AP58511 58 aa18.83■□□□□ 0.6
TRAPPC4-210ENST00000531290 SEC23BQ15437 767 aa18.83■□□□□ 0.6
TRAPPC4-210ENST00000531290 DNM1P34Q6PK57 102 aa18.83■□□□□ 0.6
TRAPPC4-210ENST00000531290 ARHGAP24Q8N264 748 aa18.83■□□□□ 0.6
TRAPPC4-210ENST00000531290 OR5L1Q8NGL2 311 aa18.83■□□□□ 0.6
TRAPPC4-210ENST00000531290 PYURFQ96I23 114 aa18.83■□□□□ 0.6
TRAPPC4-210ENST00000531290 CD300AQ9UGN4 299 aa18.83■□□□□ 0.6
TRAPPC4-210ENST00000531290 OR6C6A6NF89 314 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 IMPA2O14732 288 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 RER1O15258 196 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 TXNDC12O95881 172 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 ADRA2CP18825 462 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 CRABP1P29762 137 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 MSX2P35548 267 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 CDKN2AP42771 156 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms