RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 VPS37BQ9H9H4 285 aa3.5□□□□□ -1.85
CASP4-208ENST00000530309 PTTG3PQ9NZH4 202 aa3.5□□□□□ -1.85
CASP4-208ENST00000530309 GCNT4Q9P109 453 aa3.5□□□□□ -1.85
CASP4-208ENST00000530309 TRMT112Q9UI30 125 aaKnown RBP3.5□□□□□ -1.85
CASP4-208ENST00000530309 CEP162Q5TB80 1403 aa3.5□□□□□ -1.85
CASP4-208ENST00000530309 LRP4O75096 1905 aa3.5□□□□□ -1.85
CASP4-208ENST00000530309 ZNFX1Q9P2E3 1918 aaKnown RBP3.5□□□□□ -1.85
CASP4-208ENST00000530309 SLIT3O75094 1523 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 ARG1P05089 322 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 CD3GP09693 182 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 UBE2NP61088 152 aaKnown RBP3.49□□□□□ -1.85
CASP4-208ENST00000530309 RCAN2Q14206 197 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 FAM78AQ5JUQ0 283 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 GPR107Q5VW38 600 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 Q5W150 140 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 PRMT9Q6P2P2 845 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 TMEM220Q6QAJ8 160 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 EIF3MQ7L2H7 374 aaKnown RBP3.49□□□□□ -1.85
CASP4-208ENST00000530309 UBALD2Q8IYN6 164 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 METTL13Q8N6R0 699 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 CCDC148Q8NFR7 591 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 C15orf40Q8WUR7 153 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 XPO6Q96QU8 1125 aaKnown RBP3.49□□□□□ -1.85
CASP4-208ENST00000530309 OPN4Q9UHM6 478 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 ADAMTS13Q76LX8 1427 aa3.49□□□□□ -1.85
CASP4-208ENST00000530309 A0A1B0GW55 424 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 VAMP5O95183 116 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 ERCC1P07992 297 aaPredicted RBP3.48□□□□□ -1.85
CASP4-208ENST00000530309 DUX4L2P0CJ85 424 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 DUX4L3P0CJ86 424 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 DUX4L5P0CJ88 424 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 DUX4L6P0CJ89 424 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 DUX4L7P0CJ90 424 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 ATF6P18850 670 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 SSTR5P35346 364 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 UQCRFS1P47985 274 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 P2RX1P51575 399 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 NPSR1Q6W5P4 371 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 WDR86Q86TI4 376 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 GABRG1Q8N1C3 465 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 OR5K2Q8NHB8 316 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 SYNPRQ8TBG9 265 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 PIFOQ8TCI5 191 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 ZNF382Q96SR6 550 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 SPIN2AQ99865 258 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 SPIN2BQ9BPZ2 258 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 ANKRD60Q9BZ19 345 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 RETNQ9HD89 108 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 DDX19AQ9NUU7 478 aaKnown RBP3.48□□□□□ -1.85
CASP4-208ENST00000530309 DUX4Q9UBX2 424 aa3.48□□□□□ -1.85
CASP4-208ENST00000530309 CAMTA1Q9Y6Y1 1673 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 TMEM223A0PJW6 202 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 TMEM150BA6NC51 233 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 OR6C74A6NCV1 312 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 RAD51BO15315 384 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 RDH16O75452 317 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 GCM2O75603 506 aaPredicted RBP3.47□□□□□ -1.85
CASP4-208ENST00000530309 FLOT1O75955 427 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 AQP8O94778 261 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 EIF4EP06730 217 aaKnown RBP3.47□□□□□ -1.85
CASP4-208ENST00000530309 TPM2P07951 284 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 ADRA2AP08913 450 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 ERGP11308 486 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 RAB3AP20336 220 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 U2AF2P26368 475 aaKnown RBP eCLIP3.47□□□□□ -1.85
CASP4-208ENST00000530309 STOMP27105 288 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 HCAR3P49019 387 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 PPP1CBP62140 327 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 ABCA11PQ4W5N1 156 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 XKR4Q5GH76 650 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 NPWQ8N729 165 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 TTC29Q8NA56 475 aaPredicted RBP3.47□□□□□ -1.85
CASP4-208ENST00000530309 CHST4Q8NCG5 386 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 OR10AD1Q8NGE0 317 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 COQ8AQ8NI60 647 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 PRRC1Q96M27 445 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 CAMK2N2Q96S95 79 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 TIMM17AQ99595 171 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 C11orf70Q9BRQ4 267 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 ACTR3CQ9C0K3 210 aaPredicted RBP3.47□□□□□ -1.85
CASP4-208ENST00000530309 EXO5Q9H790 373 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 MYO10Q9HD67 2058 aa3.47□□□□□ -1.85
CASP4-208ENST00000530309 EEA1Q15075 1411 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 A0A0U1RQV1 116 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 H7C0C1 242 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 K7EMT4 169 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 L7N2F9 121 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 RBFOX2O43251 390 aaKnown RBP eCLIP3.46□□□□□ -1.86
CASP4-208ENST00000530309 RAD51CO43502 376 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 YIF1AO95070 293 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 FGFR1OPO95684 399 aaKnown RBP3.46□□□□□ -1.86
CASP4-208ENST00000530309 MUC1P15941 1255 aaPredicted RBP3.46□□□□□ -1.86
CASP4-208ENST00000530309 GALP22466 123 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 DTYMKP23919 212 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 OR1E1P30953 314 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 ATP5OP48047 213 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 RAB9AP51151 201 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 CHRFAM7AQ494W8 412 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 SMUG1Q53HV7 270 aa3.46□□□□□ -1.86
CASP4-208ENST00000530309 ZNF684Q5T5D7 378 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms