RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 RNLSQ5VYX0 342 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 NCCRP1Q6ZVX7 275 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-211ENST00000528787 HIST2H3AQ71DI3 136 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 LINGO2Q7L985 606 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 DPY19L4Q7Z388 723 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 DCXRQ7Z4W1 244 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 CDC20BQ86Y33 519 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 WFDC8Q8IUA0 241 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 TIGD4Q8IY51 512 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF679Q8IYX0 411 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 SYS1Q8N2H4 156 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF511Q8NB15 262 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 SLC30A7Q8NEW0 376 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 OR10H4Q8NGA5 316 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 OR1F12Q8NHA8 337 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 THEM6Q8WUY1 208 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 APOBEC3DQ96AK3 386 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-211ENST00000528787 SLAMF6Q96DU3 332 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 KCNJ15Q99712 375 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 MED20Q9H944 212 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 ADGRL4Q9HBW9 690 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 FGF20Q9NP95 211 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-211ENST00000528787 DDX28Q9NUL7 540 aaKnown RBP6.92□□□□□ -1.3
SSBP3-211ENST00000528787 TBCCD1Q9NVR7 557 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 B3GNT2Q9NY97 397 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 CGGBP1Q9UFW8 167 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-211ENST00000528787 POU2F3Q9UKI9 436 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 DIMT1Q9UNQ2 313 aaKnown RBP6.92□□□□□ -1.3
SSBP3-211ENST00000528787 EXOGQ9Y2C4 368 aaKnown RBP6.92□□□□□ -1.3
SSBP3-211ENST00000528787 MYRFQ9Y2G1 1151 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 SNX5Q9Y5X3 404 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 ANKHD1Q8IWZ3 2542 aaKnown RBP6.92□□□□□ -1.3
SSBP3-211ENST00000528787 SMG1Q96Q15 3661 aaKnown RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 CCDC182A6NF36 153 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 TVP23AA6NH52 213 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 M0R1B8 84 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 SLC1A7O00341 560 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 DCTN6O00399 190 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 ICMTO60725 284 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 ABHD16AO95870 558 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 TFP02787 698 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 ERCC1P07992 297 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 MMP7P09237 267 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 SELEP16581 610 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 ALOX5APP20292 161 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 CD40P25942 277 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 NAA10P41227 235 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 IDH3GP51553 393 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 PSG4Q00888 419 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 MVKQ03426 396 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 MZT1Q08AG7 82 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 ENDOGQ14249 297 aaKnown RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 GALEQ14376 348 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 CCDC58Q4VC31 144 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 FAM209AQ5JX71 171 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 NCMAPQ5T1S8 102 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 SLC22A25Q6T423 547 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF322Q6U7Q0 402 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 VASH1Q7L8A9 365 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 MDP1Q86V88 176 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF786Q8N393 782 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 KLHL36Q8N4N3 616 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 WDR31Q8NA23 367 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 BPIFB6Q8NFQ5 453 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 OR51L1Q8NGJ5 315 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 RNF133Q8WVZ7 376 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 FCGR1BQ92637 280 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 AKAP1Q92667 903 aaKnown RBP eCLIP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 FBXO17Q96EF6 278 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF837Q96EG3 531 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 WFIKKN1Q96NZ8 548 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 NR1H4Q96RI1 486 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 MND1Q9BWT6 205 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 HCAR1Q9BXC0 346 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 OR10A2Q9H208 303 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 NEK6Q9HC98 313 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 ABCB9Q9NP78 766 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 EMC7Q9NPA0 242 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 TRIM36Q9NQ86 728 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 CENPMQ9NSP4 180 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 MRPL22Q9NWU5 206 aaKnown RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 PSORS1C1Q9UIG5 152 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 RALYQ9UKM9 306 aaKnown RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 IKZF2Q9UKS7 526 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 CAB39Q9Y376 341 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 RNF115Q9Y4L5 304 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 LHFPL6Q9Y693 200 aa6.91□□□□□ -1.3
SSBP3-211ENST00000528787 SPENQ96T58 3664 aaKnown RBP6.91□□□□□ -1.3
SSBP3-211ENST00000528787 IGKV1D-43A0A0B4J1Z2 117 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 TMEM129A0AVI4 362 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 C5orf49A4QMS7 147 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 METTL15A6NJ78 407 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 A6NNC1 897 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 FAM171A2A8MVW0 826 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 M0R135 149 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 XRCC2O43543 280 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 RGS10O43665 173 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 SYNGR3O43761 229 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 WBP4O75554 376 aaKnown RBP6.9□□□□□ -1.3
SSBP3-211ENST00000528787 MTRF1O75570 445 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms