RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 NMNAT3Q96T66 252 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 PITX2Q99697 317 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 WACQ9BTA9 647 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 EGLN3Q9H6Z9 239 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 IL1RAPQ9NPH3 570 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 NRIP3Q9NQ35 241 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 CYSLTR2Q9NS75 346 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 TREM2Q9NZC2 230 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 PTTG3PQ9NZH4 202 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 CD300AQ9UGN4 299 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 PRPF19Q9UMS4 504 aaKnown RBP7.78□□□□□ -1.16
CMTM1-210ENST00000528441 N6AMT1Q9Y5N5 214 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 ABCA1O95477 2261 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 CSPG4Q6UVK1 2322 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 LOC100509620A0A075B734 347 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 IGHV1-69-2A0A0G2JMI3 117 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 ERICH4A6NGS2 130 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 IMPA2O14732 288 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 MPZL1O95297 269 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 SOX14O95416 240 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 GPANK1O95872 356 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 CST1P01037 141 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 IFNGP01579 166 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 IGFBP1P08833 259 aaPredicted RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 HIST1H1CP16403 213 aaKnown RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 SRD5A1P18405 259 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 PCMT1P22061 227 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 COL8A2P25067 703 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 MPV17P39210 176 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 CDKN2AP42771 156 aaKnown RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 SLC6A9P48067 706 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 TNFAIP6P98066 277 aaPredicted RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 BNIP1Q12981 228 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 TSPAN31Q12999 210 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 TRIM25Q14258 630 aaKnown RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 MEP1BQ16820 701 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 DNAL1Q4LDG9 190 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 PGBD2Q6P3X8 592 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 CCDC121Q6ZUS5 278 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 PTCHD4Q6ZW05 846 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 FAM122BQ7Z309 247 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 TSEN54Q7Z6J9 526 aaKnown RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 LINC00346Q8IVM7 164 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 C1orf174Q8IYL3 243 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 ZNF101Q8IZC7 436 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 OR5AS1Q8N127 324 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 LINC01356Q8N9X3 169 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 ATG16L2Q8NAA4 619 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 GJC3Q8NFK1 279 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 OR5L1Q8NGL2 311 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 OR1F12Q8NHA8 337 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 TEX47Q8TBZ9 253 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 KLF14Q8TD94 323 aaPredicted RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 CCL17Q92583 94 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 POP5Q969H6 163 aaKnown RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 NMD3Q96D46 503 aaKnown RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 CLPTM1LQ96KA5 538 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 COG8Q96MW5 612 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 GPX7Q96SL4 187 aaPredicted RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 GAL3ST1Q99999 423 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 TSSK6Q9BXA6 273 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 ZNF556Q9HAH1 456 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 ZNF275Q9NSD4 429 aaPredicted RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 UBAP1Q9NZ09 502 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 VSX1Q9NZR4 365 aaPredicted RBP7.77□□□□□ -1.17
CMTM1-210ENST00000528441 KIF17Q9P2E2 1029 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 CDH10Q9Y6N8 788 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 ZFHX3Q15911 3703 aa7.77□□□□□ -1.17
CMTM1-210ENST00000528441 NAV3Q8IVL0 2385 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 OR6C6A6NF89 314 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 VWC2LB2RUY7 222 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 F5H5K5 113 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 RER1O15258 196 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 PTP4A3O75365 173 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 NCR1O76036 304 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 NGFP01138 241 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 SEMG1P04279 462 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 SPARCP09486 303 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 COX5BP10606 129 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 ZNF250P15622 560 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 POU1F1P28069 291 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 PYCR1P32322 319 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 LIPAP38571 399 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 WNT5AP41221 380 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 RGS6P49758 472 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 ERFP50548 548 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 RAD23AP54725 363 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 LSM6P62312 80 aaKnown RBP7.76□□□□□ -1.17
CMTM1-210ENST00000528441 KRTAP1-1Q07627 177 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 SLC3A1Q07837 685 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 MALLQ13021 153 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 FLOT2Q14254 428 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 ELFN2Q5R3F8 820 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 OR2T5Q6IEZ7 315 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 LCN8Q6JVE9 175 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 CORO6Q6QEF8 472 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 ZNF620Q6ZNG0 422 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 FOXL2NBQ6ZUU3 175 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 GLCCI1Q86VQ1 547 aa7.76□□□□□ -1.17
CMTM1-210ENST00000528441 HIPK1Q86Z02 1210 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms