RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 OPN4Q9UHM6 478 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 KLHL21Q9UJP4 597 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 NDRG4Q9ULP0 352 aaKnown RBP8.92□□□□□ -0.98
CPSF1-203ENST00000527916 TEX13CA0A0J9YWL9 993 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 CLDN34H7C241 214 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 CDC14BO60729 498 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 DEAF1O75398 565 aaPredicted RBP8.91□□□□□ -0.98
CPSF1-203ENST00000527916 NCR1O76036 304 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 TXNDC12O95881 172 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 IGHV2-5P01817 119 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 SDHAP31040 664 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 WNT5AP41221 380 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 MMP15P51511 669 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 ARHGDIAP52565 204 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 LSM6P62312 80 aaKnown RBP8.91□□□□□ -0.98
CPSF1-203ENST00000527916 KRT72Q14CN4 511 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 MESTQ5EB52 335 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 ARMCX4Q5H9R4 360 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 AVPI1Q5T686 147 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 DPY19L2P2Q6ZN68 376 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 C17orf107Q6ZR85 190 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 PIGWQ7Z7B1 504 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 ADCK1Q86TW2 530 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 PGAM4Q8N0Y7 254 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 KLF14Q8TD94 323 aaPredicted RBP8.91□□□□□ -0.98
CPSF1-203ENST00000527916 RAB1CQ92928 201 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 POP5Q969H6 163 aaKnown RBP8.91□□□□□ -0.98
CPSF1-203ENST00000527916 PYURFQ96I23 114 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 FAM46AQ96IP4 442 aaKnown RBP8.91□□□□□ -0.98
CPSF1-203ENST00000527916 C4orf45Q96LM5 186 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 ZNF570Q96NI8 536 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 CCT8L2Q96SF2 557 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 DIRC2Q96SL1 478 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 MMP27Q9H306 513 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 OR51B6Q9H340 312 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 TBCCD1Q9NVR7 557 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 VSX1Q9NZR4 365 aaPredicted RBP8.91□□□□□ -0.98
CPSF1-203ENST00000527916 CD300AQ9UGN4 299 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 MAGEL2Q9UJ55 1249 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 NUP50Q9UKX7 468 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 ADAM18Q9Y3Q7 739 aa8.91□□□□□ -0.98
CPSF1-203ENST00000527916 IGHV1-69-2A0A0G2JMI3 117 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 A0A1B0GUS0 222 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 A0A1W2PPL8 197 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 CLDN25C9JDP6 229 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 M0QZ24 198 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 IMPA2O14732 288 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 KHDRBS3O75525 346 aaKnown RBP8.9□□□□□ -0.98
CPSF1-203ENST00000527916 SEMG1P04279 462 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 SCG5P05408 212 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 ZNF81P51508 661 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 RPS6KA3P51812 740 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 FXYD6P3P58550 94 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 PPP1CBP62140 327 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 CCL8P80075 99 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 SCRN3Q0VDG4 424 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 KCNMB1Q16558 191 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 ALKBH6Q3KRA9 238 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 FBLN7Q53RD9 439 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 SAMD4BQ5PRF9 694 aaKnown RBP8.9□□□□□ -0.98
CPSF1-203ENST00000527916 ZNF774Q6NX45 483 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 LEG1Q6P5S2 330 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 ZER1Q7Z7L7 766 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 GLB1L2Q8IW92 636 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 FAM86B1Q8N7N1 296 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 ICA1LQ8NDH6 482 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 SLC25A40Q8TBP6 338 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 COG8Q96MW5 612 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 GAL3ST1Q99999 423 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 OR2J1Q9GZK6 312 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 DECR2Q9NUI1 292 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 NDE1Q9NXR1 346 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 PLEK2Q9NYT0 353 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 ZDHHC8Q9ULC8 765 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 AURKCQ9UQB9 309 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 ARL2BPQ9Y2Y0 163 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 MMP24Q9Y5R2 645 aa8.9□□□□□ -0.98
CPSF1-203ENST00000527916 TANC2Q9HCD6 1990 aa8.9□□□□□ -0.99
CPSF1-203ENST00000527916 PPIAL4EA0A075B759 164 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 PPIAL4CA0A0B4J2A2 164 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 TRBV4-1A0A0J9YWV2 114 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 PLSCR5A0PG75 271 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 UNC119BA6NIH7 251 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 PPIAL4DF5H284 164 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 TIMM23O14925 209 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 ARPC3O15145 178 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 TPD52L2O43399 206 aaKnown RBP8.89□□□□□ -0.99
CPSF1-203ENST00000527916 SGCEO43556 437 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 SLC16A7O60669 478 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 DCTN3O75935 186 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 GADD45GO95257 159 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 KNG1P01042 644 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 NGFP01138 241 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 IGHV1-46P01743 117 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 CD55P08174 381 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 PPIAL4FP0DN26 164 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 CTLA4P16410 223 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 MDKP21741 143 aaPredicted RBP8.89□□□□□ -0.99
CPSF1-203ENST00000527916 CRABP1P29762 137 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 MPV17P39210 176 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms