RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 EVA1AQ9H8M9 152 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 GPN2Q9H9Y4 310 aaPredicted RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 AMBNQ9NP70 447 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 NGBQ9NPG2 151 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 AKIP1Q9NQ31 210 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 ASCL3Q9NQ33 180 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 MEPEQ9NQ76 525 aaPredicted RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 C12orf4Q9NQ89 552 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 EXOSC3Q9NQT5 275 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 PAK1IP1Q9NWT1 392 aaPredicted RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 RHBDL2Q9NX52 303 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 ANKRD10Q9NXR5 420 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 TVP23BQ9NYZ1 205 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 MED11Q9P086 117 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 KLHL9Q9P2J3 617 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 ENOPH1Q9UHY7 261 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 OSGIN1Q9UJX0 560 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 ICAM5Q9UMF0 924 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 VDAC3Q9Y277 283 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 YARS2Q9Y2Z4 477 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 MED31Q9Y3C7 131 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 STRAPQ9Y3F4 350 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 ABCA4P78363 2273 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 A0A087WXM4 84 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 TMED7-TICAM2A0A0A6YYA0 188 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 A0A1W2PQ72 361 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 TMEM72A0PK05 275 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 ANKUB1A6NFN9 424 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 IFNL4K9M1U5 179 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 TP53I11O14683 189 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 TLX2O43763 284 aaPredicted RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 PRKYO43930 277 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SSX5O60225 188 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 ENTPD6O75354 484 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 RHBDL1O75783 438 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CBR3O75828 277 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 OR7A10O76100 309 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SLC2A10O95528 541 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 PPP1R3DO95685 299 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 MT-ND2P03891 347 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SERPINA7P05543 415 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CCL3P10147 92 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SAGP10523 405 aaPredicted RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 PNMTP11086 282 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 LIFP15018 202 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 NAGAP17050 411 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 WT1P19544 449 aaPredicted RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 PGCP20142 388 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 HOXA5P20719 270 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 GSTM3P21266 225 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CPT2P23786 658 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CXCR1P25024 350 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 ITGA3P26006 1051 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 RBM34P42696 430 aaKnown RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 SLC1A3P43003 542 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 ALDH3B1P43353 468 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SLC9A3P48764 834 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SMSP52788 366 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CAPZA1P52907 286 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 TPTEP56180 551 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CTBP2P56545 445 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 PSPHP78330 225 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CDK5Q00535 292 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 PMP22Q01453 160 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 EGR4Q05215 589 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 LTBQ06643 244 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 FOXF1Q12946 379 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SCGB2A2Q13296 93 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 FHL1Q13642 323 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 NEDD8Q15843 81 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SNAPC1Q16533 368 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 MEP1BQ16820 701 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 PGGHGQ32M88 737 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 ZNF791Q3KP31 576 aaPredicted RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 NADK2Q4G0N4 442 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 PLAC9Q5JTB6 97 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SLC27A4Q6P1M0 643 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 VWA1Q6PCB0 445 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 ZNF773Q6PK81 442 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SMARCD3Q6STE5 483 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 OPN5Q6U736 354 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 ARSKQ6UWY0 536 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CASP12Q6UXS9 341 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 Q6ZWC4 215 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 TMPRSS11FQ6ZWK6 438 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 AHSA2Q719I0 299 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SATL1Q86VE3 508 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 IGFN1Q86VF2 1251 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CDK20Q8IZL9 346 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 RNF113BQ8IZP6 322 aaKnown RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 CADM3Q8N126 398 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 BEST3Q8N1M1 668 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 KDM8Q8N371 416 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 LRRC17Q8N6Y2 441 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 EXD3Q8N9H8 876 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 ATP6V1C2Q8NEY4 427 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 OR5T1Q8NG75 326 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 OR2M3Q8NG83 312 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 OR4K17Q8NGC6 315 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 OR5M1Q8NGP8 315 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms