RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 KLHL24Q6TFL4 600 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 Q6ZTK2 550 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 ADGRE4PQ86SQ3 457 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 BIVMQ86UB2 503 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 MEIOBQ8N635 442 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 NOXO1Q8NFA2 376 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 OR4C16Q8NGL9 310 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 GPX8Q8TED1 209 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 PIGKQ92643 395 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 SLAMF6Q96DU3 332 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 SCPEP1Q9HB40 452 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 FAM206AQ9NX38 181 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 GPN3Q9UHW5 284 aaPredicted RBP13.69□□□□□ -0.22
USH1C-207ENST00000527720 HDGFL3Q9Y3E1 203 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 LDLRAD4O15165 306 aa13.68□□□□□ -0.22
USH1C-207ENST00000527720 CLRN1P58418 232 aa13.68□□□□□ -0.22
USH1C-207ENST00000527720 PCOLCEQ15113 449 aa13.68□□□□□ -0.22
USH1C-207ENST00000527720 ZBTB37Q5TC79 503 aa13.68□□□□□ -0.22
USH1C-207ENST00000527720 FAAP20Q6NZ36 180 aa13.68□□□□□ -0.22
USH1C-207ENST00000527720 NLRC3Q7RTR2 1065 aa13.68□□□□□ -0.22
USH1C-207ENST00000527720 OR6N1Q8NGY5 312 aa13.68□□□□□ -0.22
USH1C-207ENST00000527720 ZBTB8AQ96BR9 441 aa13.68□□□□□ -0.22
USH1C-207ENST00000527720 CDX2Q99626 313 aaPredicted RBP13.68□□□□□ -0.22
USH1C-207ENST00000527720 SLCO5A1Q9H2Y9 848 aa13.68□□□□□ -0.22
USH1C-207ENST00000527720 CENPMQ9NSP4 180 aa13.68□□□□□ -0.22
USH1C-207ENST00000527720 SLC23A1Q9UHI7 598 aa13.68□□□□□ -0.22
USH1C-207ENST00000527720 LOC102725191A0A1B0GVB3 256 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 KDM4BO94953 1096 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 PGA4P0DJD7 388 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 PGA3P0DJD8 388 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 TDGF1P13385 188 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 PER3P56645 1201 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 FAM198BQ6UWH4 519 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 LYPD6Q86Y78 171 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 OR4K17Q8NGC6 315 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 OR2T35Q8NGX2 323 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 OXGR1Q96P68 337 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 SORCS2Q96PQ0 1159 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 EMC6Q9BV81 110 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 METTL17Q9H7H0 456 aaPredicted RBP13.67□□□□□ -0.22
USH1C-207ENST00000527720 MOB1AQ9H8S9 216 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 FSCN3Q9NQT6 498 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 ZNF107Q9UII5 783 aaPredicted RBP13.67□□□□□ -0.22
USH1C-207ENST00000527720 ELF5Q9UKW6 265 aaPredicted RBP13.67□□□□□ -0.22
USH1C-207ENST00000527720 MRPS18BQ9Y676 258 aaKnown RBP13.67□□□□□ -0.22
USH1C-207ENST00000527720 A0A087WZY1 265 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 TRAF3IP2O43734 574 aaPredicted RBP13.67□□□□□ -0.22
USH1C-207ENST00000527720 LPLP06858 475 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 GIPP09681 153 aaPredicted RBP13.67□□□□□ -0.22
USH1C-207ENST00000527720 GTF2F2P13984 249 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 RAB6AP20340 208 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 SDHBP21912 280 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 SELENOPP49908 381 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 DUSP3P51452 185 aaPredicted RBP13.67□□□□□ -0.22
USH1C-207ENST00000527720 CORO6Q6QEF8 472 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 CDH26Q8IXH8 852 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 ELMOD2Q8IZ81 293 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 WDSUB1Q8N9V3 476 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 CLEC1AQ8NC01 280 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 OR6X1Q8NH79 312 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 SEC22CQ9BRL7 303 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 FBXL2Q9UKC9 423 aa13.67□□□□□ -0.22
USH1C-207ENST00000527720 CHCHD2Q9Y6H1 151 aaPredicted RBP13.67□□□□□ -0.22
USH1C-207ENST00000527720 C19orf67A6NJJ6 358 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 D6RAR5 112 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 KLK3P07288 261 aaPredicted RBP13.66□□□□□ -0.22
USH1C-207ENST00000527720 MELTFP08582 738 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 ACSM4P0C7M7 580 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 ANXA7P20073 488 aaKnown RBP13.66□□□□□ -0.22
USH1C-207ENST00000527720 IKZF1Q13422 519 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 EXT1Q16394 746 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 OR51A2Q8NGJ7 313 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 OR5B2Q96R09 309 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 GINS4Q9BRT9 223 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 KCNK15Q9H427 330 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 MGAT4CQ9UBM8 478 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 ZNF69Q9UC07 566 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 IGHV1-45A0A0A0MS14 117 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 DCDC2BA2VCK2 349 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 P2RY10O00398 339 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 NTN3O00634 580 aaPredicted RBP13.66□□□□□ -0.22
USH1C-207ENST00000527720 DOK2O60496 412 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 TTRP02766 147 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 CFIP05156 583 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 HSD11B1P28845 292 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 TAS2R19P59542 299 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 GUCA2AQ02747 115 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 SPOCK1Q08629 439 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 OPN5Q6U736 354 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 TEX261Q6UWH6 196 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 SLC36A1Q7Z2H8 476 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 JAGN1Q8N5M9 183 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 TMEM229BQ8NBD8 167 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 AGBL5Q8NDL9 886 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 OR8H1Q8NGG4 311 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 PBOV1Q9GZY1 135 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 ZNF700Q9H0M5 742 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 AKIRIN1Q9H9L7 192 aaPredicted RBP13.66□□□□□ -0.22
USH1C-207ENST00000527720 B3GNT2Q9NY97 397 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 CGGBP1Q9UFW8 167 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms